DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Spn43Aa and LOC299277

DIOPT Version :9

Sequence 1:	NP_524805.1	Gene:	Spn43Aa / 45041	FlyBaseID:	FBgn0024294	Length:	390	Species:	Drosophila melanogaster
Sequence 2:	XP_008763124.2	Gene:	LOC299277 / 299277	RGDID:	1595900	Length:	420	Species:	Rattus norvegicus

Alignment Length:	323	Identity:	91/323 - (28%)
Similarity:	166/323 - (51%)	Gaps:	13/323 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKD-GLAESYH 93
            ||..|::.||....::|:..||:||..||.....||:|.|..|:.:.|..:..|:.: .:.::|.
  Rat    54 FAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEIDIHQNYR 118

  Fly    94 NLLH--SYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVK 156
            :||.  |....:..:..||.::..::|.:.:.|:|.|:..:.:||...||.:..||.:.||.:|.
  Rat   119 DLLQRLSQPGGQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKFINDYVM 183

  Fly   157 QQTENKIERVVESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNW- 220
            .|::.||:.:|..||..|::.::|.:.|..:|:.||:.:||...:|.|...|.::|..|..::.
  Rat   184 IQSQGKIKEMVTELEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVKVLMMKTEDLT 248

  Fly   221 --YYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSV-SV 282
              |::.:  ||....:||.::.....| ||||:| ..::.:|..|.........|..:.:.: .:
  Rat   249 TPYFWDE--ELKCTVVELNYKGHGKAM-FILPDQ-GKMEQVEASLHPGTLRKWTDSLKPRIIDEL 309

  Fly   283 YLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEA 345
            :||||.......|...|.::||..:|:..||.|.|.....:  |::::.|.|.:.:.|.|.||
  Rat   310 HLPKFSLSKTYKLENILPELGIMDVFNTQADLSGIAGAKDV--RVSQMIHNTVLGMAETGTEA 370

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Spn43Aa	NP_524805.1	SERPIN	28..387	CDD:238101	91/323 (28%)
LOC299277	XP_008763124.2	serpinA3_A1AC	37..417	CDD:381019	91/323 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11461
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X28
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010