DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpina3c

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_036789.2 Gene:Serpina3c / 24794 RGDID:2972 Length:416 Species:Rattus norvegicus


Alignment Length:386 Identity:116/386 - (30%)
Similarity:190/386 - (49%) Gaps:23/386 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EGLGNTIKDRNL------FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKT 76
            :|.|..:....|      |...|::.||....|:||:.||:||..||.:...||:..|..|:.:.
  Rat    34 QGKGRQLHSLTLASINTDFTLSLYKKLALRNPDKNVVFSPLSISAALAILSLGAKDSTMEEILEG 98

  Fly    77 LHASAKE-SKDGLAESYHNLLHSYIKSKTVLEI--ANKVYTRQNLTVSSHFREVAQKYFDSEVEP 138
            |..:..| :::.:.:.:.:||....:.:...||  .:.::..:...:.|.|:|..:..:.:|...
  Rat    99 LKFNLTEITEEEIHQGFGHLLQRLSQPEDQAEINTGSALFIDKEQPILSEFQEKTRALYQAEAFV 163

  Fly   139 LDFSRETEAVEQINRWVKQQTENKIERVVESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFW 203
            .||.:..||.:.||.:|..||:.||..:...|:..|::.|||.:.||.:|..|||..||.:.||:
  Rat   164 ADFKQCNEAKKFINDYVSNQTQGKIAELFSDLDERTSMVLVNYLLFKGKWKVPFNPNDTFESEFY 228

  Fly   204 LSESRSIQVPTM-FADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVD 267
            |.|.||::||.| ..|....|....||....:||.:.. |.:..||||:| ..:|.:|..|:...
  Rat   229 LDEKRSVKVPMMKIKDLTTPYVRDEELSCSVLELKYTG-NASALFILPDQ-GKMQQVESSLQPET 291

  Fly   268 FNLLEDRWQWQSVS-VYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTR---IT 328
            ....:|..:.:.:| :.:|||....|.:|...|.::||..:||..||.|.|     .||:   ::
  Rat   292 LKKWKDSLRPRIISELRMPKFSISTDYNLEEVLPELGIRKIFSQQADLSRI-----TGTKNLHVS 351

  Fly   329 KVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRDKH--AVYFTGHI 387
            :|.||..:||:|.|.|.|.|:.......|||........:.||..:|.|.:  :|:|.|.:
  Rat   352 QVVHKAVLDVDETGTEGAAATAVTAALKSLPQTVPLLNFNRPFMLVITDNNGQSVFFMGKV 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 114/377 (30%)
Serpina3cNP_036789.2 serpinA3_A1AC 36..416 CDD:381019 115/384 (30%)
RCL 365..392 7/26 (27%)

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