DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpina1

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001421270.1 Gene:Serpina1 / 24648 RGDID:3326 Length:411 Species:Rattus norvegicus


Alignment Length:418 Identity:122/418 - (29%)
Similarity:205/418 - (49%) Gaps:56/418 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IILLGVWISAPEGLGNTIKD----------------RNL--FATELFQTLATDRQDENVIISPVS 53
            ::|.|:...||..|....::                .||  ||..|::.|.......|:..||:|
  Rat    10 LLLAGLCCLAPSFLAEDAQETDTSQQDQSPTYRKISSNLADFAFSLYRELVHQSNTSNIFFSPMS 74

  Fly    54 IQLALGLAYYGAEGRTAAELQKTLHASAKESKDG-LAESYHNLLHSYIK--SKTVLEIANKVYTR 115
            |..|..:...|::|.|..::.:.|..:..:..:. :.:::|:||.:..:  |:..|...|.::..
  Rat    75 ITTAFAMLSLGSKGDTRKQILEGLEFNLTQIPEADIHKAFHHLLQTLNRPDSELQLNTGNGLFVN 139

  Fly   116 QNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVESLEPDTNVALVN 180
            :||.:...|.|..:..:.||...::|:...||.:.||.:|::.|:.||..:::.|:.||..||||
  Rat   140 KNLKLVEKFLEEVKNNYHSEAFSVNFADSEEAKKVINDYVEKGTQGKIVDLMKQLDEDTVFALVN 204

  Fly   181 AIYFKARWARPFNDEDTRDREFWLSESRSIQVPTM------------FADNWYYYADYPELDAKA 233
            .|:||.:|.||||.|.|||.:|.:.:|.:::||.|            ...:|....||..     
  Rat   205 YIFFKGKWKRPFNPEHTRDADFHVDKSTTVKVPMMNRLGMFDMHYCSTLSSWVLMMDYLG----- 264

  Fly   234 IELFFENINLTMWFILPNQRSGLQALEQKL-KGVDFNLLEDRWQWQSVSVYLPKFKFEFDTDLRP 297
                    |.|..|:||:. ..:|.|||.| |.:....|.:| |.:|..:|.||.......:|:.
  Rat   265 --------NATAIFLLPDD-GKMQHLEQTLTKDLISRFLLNR-QTRSAILYFPKLSISGTYNLKT 319

  Fly   298 TLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDP 362
            .|..:||:.:|::.||.|.|.:|:|:  ::::..||..:.::|.|.|||||:....||||||...
  Rat   320 LLSSLGITRVFNNDADLSGITEDAPL--KLSQAVHKAVLTLDERGTEAAGATVVEAVPMSLPPQV 382

  Fly   363 KTFVADHPFAFII--RDKHAVYFTGHIV 388
            |   .||||.|:|  .:..:..|.|.::
  Rat   383 K---FDHPFIFMIVESETQSPLFVGKVI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 117/382 (31%)
Serpina1NP_001421270.1 serpinA1_A1AT 44..411 CDD:381012 117/384 (30%)
RCL 367..386 9/21 (43%)

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