DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpina1c

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:424 Identity:115/424 - (27%)
Similarity:204/424 - (48%) Gaps:61/424 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WLSIILLGVWISAPEGLGNTI-------KDR---------NL--FATELFQTLATDRQDENVIIS 50
            |..::|.|:....|..|...:       ||:         ||  ||..|::.|.......|:..|
Mouse     7 WGLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFAISLYRELVHQSNTSNIFFS 71

  Fly    51 PVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDG-LAESYHNLLHSYIKSKTVLEIA--NKV 112
            ||||..|..:...|::|.|..::.:.|..:..::.:. :.:|:.:||.:..:..:.|:::  |.:
Mouse    72 PVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTLNRPDSELQLSTGNGL 136

  Fly   113 YTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVESLEPDTNVA 177
            :...:|.:...|.|.|:.::.:||..::|:...||.:.||.:|::.|:.||...|:.|:.||..|
Mouse   137 FVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIAEAVKKLDQDTVFA 201

  Fly   178 LVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTM------------FADNWYYYADYPELD 230
            |.|.|.||.:|.:||:.|:|.:.||.:.||.:::||.|            ...:|....||..  
Mouse   202 LANYILFKGKWKKPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVHHCSTLSSWVLLMDYAG-- 264

  Fly   231 AKAIELFFENINLTMWFILPNQRSGLQALEQKLKG---VDFNLLEDRWQWQSVSVYLPKFKFEFD 292
                       |.|..|:||:. ..:|.|||.|..   ..|.|...|   :...::.|:.....:
Mouse   265 -----------NATAVFLLPDD-GKMQHLEQTLSKELISKFLLKRPR---RLAQIHFPRLSISGE 314

  Fly   293 TDLRPTLHKMGISAMFSDAADFSNIFQD-SPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPM 356
            .:|:..:..:||:.:|::.||.|.|.:: :|:  ::::..||..:.::|.|.|||.|:....||.
Mouse   315 YNLKTLMSPLGITRIFNNGADLSGITEENAPL--KLSQAVHKAVLTMDETGTEAAAATVLLAVPY 377

  Fly   357 SLPLDPKTFVADHPFAFIIRDKH--AVYFTGHIV 388
            |:   |.....||||.|||.::|  :..|.|.:|
Mouse   378 SM---PPIVRFDHPFLFIIFEEHTQSPLFVGKVV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 108/394 (27%)
Serpina1cNP_033271.1 serpinA1_A1AT 44..412 CDD:381012 108/387 (28%)

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