DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and srp-8

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:380 Identity:95/380 - (25%)
Similarity:175/380 - (46%) Gaps:53/380 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FATELFQTLATDRQD--ENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDG-LAES 91
            ||.:|..     :||  ::.:.||::|.|||...|..|.|.|.:::...|.   |.:.|| :...
 Worm    18 FALKLLH-----QQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLF---KNATDGEMVTH 74

  Fly    92 YHNL--LHSYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRW 154
            :.|:  ..|.:|....::|.|.:..|..:...|...:..:..::.||...|...|.|.::.||:.
 Worm    75 FSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKL 139

  Fly   155 VKQQTENKIERVVE--SLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFA 217
            :::.|:..|:::..  |::.|..|..::|..|:|:|...|:...|..:||:.:.:....:..:.|
 Worm   140 IRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKFLHA 204

  Fly   218 DNWYYYADYPELDA-KAIELFFENINLTMWFILPNQRSGL-QALE-------QKLKGVDFNLLED 273
            ..  ....|.|.|. :.:.|.:.:.:..|...||.::.|| :||:       |:||....|.|  
 Worm   205 TG--ANRKYCENDKFQVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTSTIQELKSNVSNYL-- 265

  Fly   274 RWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDV 338
                  |:|.:|.::.|.:.||..||..:||:.:.:::|...|..::    ..|::..||..|:|
 Worm   266 ------VNVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNFAEN----VHISEFIHKAIIEV 320

  Fly   339 NEIGCEAAGASYA--------AGVPMSLPLDPKTFVADHPFAFIIRDKHAVYFTG 385
            ||.|...|..:..        .|       :.:.|:|||||.:.|..|:::.|.|
 Worm   321 NENGTSPATNTKVITKRWREETG-------EIRDFIADHPFLYTIHYKNSILFMG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 95/380 (25%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 95/380 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.830

Return to query results.
Submit another query.