DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpinb2

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:424 Identity:124/424 - (29%)
Similarity:196/424 - (46%) Gaps:77/424 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGNTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASA--- 81
            :.||     :||..|.:.:......:|:.|||.||...|.:...||.|.|..::.|.|..:.   
Mouse     6 MANT-----MFALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGS 65

  Fly    82 -------KESKDGL-------AESYHNL---------LHSYIKSKT----------VLEIANKVY 113
                   .|:..|.       .|:|.:.         :||...|.:          :||.|||::
Mouse    66 YGITTRNPENFSGCDFAQQIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLF 130

  Fly   114 TRQNLTVSSHFREVAQKYFDSEVEPLDFSR-ETEAVEQINRWVKQQTENKIERVVE--SLEPDTN 175
            ..::......:.::::||:.:|.|.:||.. ..||.|:||.|||.||:.:|..::.  |::.||.
Mouse   131 GEKSARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTK 195

  Fly   176 VALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFAD---NWYYYADYPELDAKAIELF 237
            :.||||:|||.:|..||..:......|.::...||.|..||..   |..|..|   |..:.:||.
Mouse   196 MVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKD---LKTQILELP 257

  Fly   238 FENINLTMWFILPNQ----RSGLQALEQKLKGVDFN--LLEDRWQWQSVSVYLPKFKFEFDTDLR 296
            ... |::|..:||::    .:||:.||.::...:||  :.:|......|.||:||||.....:|:
Mouse   258 HTG-NISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELK 321

  Fly   297 PTLHKMGISAMFSDA-ADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAA-------G 353
            ..|..||:...|:.. |:||.:.:.:.:  .:::|.|:..:||.|.|..|||.:.|.       |
Mouse   322 SILQSMGMEDAFNKGKANFSGMSERNDL--FLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHG 384

  Fly   354 VPMSLPLDPKTFVADHPFAFIIRDK--HAVYFTG 385
            .|.        |||||||.|.|.||  |.:.|.|
Mouse   385 GPQ--------FVADHPFLFFIMDKITHTILFVG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 122/416 (29%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 124/424 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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