DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and srp-7

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:378 Identity:107/378 - (28%)
Similarity:182/378 - (48%) Gaps:34/378 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GLGNTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKE 83
            ||| .::.:|:              .|::..||:||.|||.|.:..|:|.|..::::.|   .|.
 Worm    19 GLG-LLRQQNI--------------SESLAFSPLSIALALSLVHVAAKGETRDQIREAL---VKG 65

  Fly    84 SKD-GLAESYHNLLHSYIKSK--TVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRET 145
            |.| .|.:.:.|:..:.:.::  |.:::||.|:||....:...:.:..:|.:::....|||..:.
 Worm    66 STDEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKE 130

  Fly   146 EAVEQINRWVKQQTENKIERVV--ESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESR 208
            ...|.||.:|::.|.:.|::::  :|:..|....|.||:||||.|...|..:.|...||:.|...
 Worm   131 ATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADS 195

  Fly   209 SIQVPTMFADNWYYYADYPELDA-KAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLE 272
            ..::..:.|.:  ...||.|.|. :.:.|.:::....:...||..|.||....:.|.......|.
 Worm   196 KREIDFLHASS--VSRDYAENDQFQVLSLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLL 258

  Fly   273 DRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFID 337
            ......||:|.:||:|.|....|...|..:||...|.:.||..|:..    |..::||.||..|:
 Worm   259 SNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMAD----GLYVSKVTHKALIE 319

  Fly   338 VNEIGCEAAGA---SYAAGVPMSLPLDPKTFVADHPFAFII-RDKHAVYFTGH 386
            |:|.|.:||.|   |.:....|.:..:||.|.|||||.|:: :|.|.::...|
 Worm   320 VDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVGLH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 104/370 (28%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 106/376 (28%)

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