DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and srp-2

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:365 Identity:126/365 - (34%)
Similarity:189/365 - (51%) Gaps:25/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHN 94
            ||.:|   |||.....:|::||:||.|.|.|.:.||.|.|..||:..|..|.      :.|.:..
 Worm    11 FALKL---LATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSR------IFEEFSG 66

  Fly    95 LLHSYIKSKTVLE--IANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQ 157
            |:.:...:...:|  |.|:|:..|..|:...:.|..:|.:.:..|.||||:..:|.:.:|.:|:.
 Worm    67 LMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVEN 131

  Fly   158 QTENKIERVVESLEPDTNVA-LVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNWY 221
            .|..||:.::.:...:...| ||||:||||.|...|..|.|..|||:.||:.|.|:|  |.....
 Worm   132 HTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIP--FLTELD 194

  Fly   222 YYADYPELDA--KAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDF-NLLEDRWQWQSVSVY 283
            .:.||.| |.  :.:.|.:.:...|:...||.||.||....:|:.|... |||.| .:...|||.
 Worm   195 EHRDYTE-DVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLND-LKSSYVSVQ 257

  Fly   284 LPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGA 348
            :||||.|.:.||:.||..:||..:|::.||.|.|.....|.:.|    ||..|:|:|.|..||.|
 Worm   258 IPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKVFISSGI----HKAIIEVDEDGTTAAAA 318

  Fly   349 S-YAAGVPMSLPLDPKTFVADHPFAF-IIRDKHAVYFTGH 386
            | :...:.|.:..:|..|||||||.| ::.:.|.::...|
 Worm   319 SAFKVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLGVH 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 126/365 (35%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 125/363 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.830

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