DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpina3c

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:335 Identity:106/335 - (31%)
Similarity:175/335 - (52%) Gaps:29/335 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDG-LAESYH 93
            ||..|::.||....|.|::.||:||..||.:...||:|.|..|:.:.|:.:..|:.:. :.:.:.
Mouse    73 FAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFG 137

  Fly    94 NLLH--SYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVK 156
            :||.  |:...:..:...:.::..::|.:.:.|:|.|:..:.:|....||.:..||.:.||.:|.
Mouse   138 HLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVS 202

  Fly   157 QQTENKIERVVESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNWY 221
            .||:.||:.::..|:.||.:.|||.||||.:|..|||..||.:.||:|...||::||.|......
Mouse   203 NQTQRKIKGLISDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKTLT 267

  Fly   222 --YYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSV---- 280
              |:.| .||....:||.::. |.:..||||:| ..:|.:|..|:.      |...:|::.    
Mouse   268 TPYFRD-EELSCTVVELKYKG-NASALFILPDQ-GRMQQVEASLQP------ETLRKWKNSLRPR 323

  Fly   281 ---SVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTR---ITKVQHKTFIDVN 339
               .:|||||....|..|:..|.::||..:||..||.|.|     .||:   ::::.||..:||.
Mouse   324 KMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGI-----TGTKDLIVSQMVHKAVLDVA 383

  Fly   340 EIGCEAAGAS 349
            |.|.|...|:
Mouse   384 ETGTEGVAAT 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 106/335 (32%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 106/335 (32%)

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