DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and Serpina6

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_031644.1 Gene:Serpina6 / 12401 MGIID:88278 Length:397 Species:Mus musculus


Alignment Length:389 Identity:109/389 - (28%)
Similarity:195/389 - (50%) Gaps:29/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WLSIILLGVWISAPEGLGNTIKDRNL------FATELFQTLATDRQDENVIISPVSIQLALGLAY 62
            ||  ...|:|.:......::...|:|      ||..|::.|.....|:|.:||||||.:||.:..
Mouse    11 WL--CTSGLWTTQAVTDEDSSSHRDLAPTNVDFAFNLYKRLVALNSDKNTLISPVSISMALAMLS 73

  Fly    63 YGAEGRTAAELQKTLHASAKESKDGLAESYHNLLHSYIKSKTVLE--IANKVYTRQNLTVSSHFR 125
            ....|.| ..|:......:|.|:..:.:.:..|.....:|.|.||  :.|.::..|||.:...|.
Mouse    74 LSTRGST-QYLENLGFNMSKMSEAEIHQGFQYLNSLLQQSDTGLEMNMGNVMFLLQNLKLKDSFL 137

  Fly   126 EVAQKYFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVESLEPDTNVALVNAIYFKARWAR 190
            ...:.|::||...:.....|:|.||||..||.:|:.|||.||..|:....:.|:|.|:.|..|..
Mouse   138 ADTKHYYESEALTIPSKDWTKAGEQINNHVKNKTQGKIEHVVSDLDSSATLILINYIFLKGIWKL 202

  Fly   191 PFNDEDTRDREFWLSESRSIQVPTMF-ADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRS 254
            ||:.|:||:.:|:::|:.:::||.|. :.|..|:.| ..:..:.:::.:.. |.|.:.|||:|..
Mouse   203 PFSPENTREEDFYVNETSTVKVPMMVQSGNISYFRD-SAIPCQMVQMNYVG-NGTTFIILPDQGQ 265

  Fly   255 GLQALEQKLKGVDFNLLEDRWQW----QSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFS 315
                ::..:..::.:.: |||..    :.:::|:|||......||:..|..:||..:|::.:||:
Mouse   266 ----MDTVVAALNRDTI-DRWGKLMIPRQMNLYIPKFSMSDTYDLQDVLADVGIKDLFTNQSDFA 325

  Fly   316 NIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRDKH 379
            :..:|:|:   ...|.||..:.::|.....|..:   |.|:.||.:..|...:.||.|:..||:
Mouse   326 DTTKDTPL---TLTVLHKAMLQLDEGNVLPAATN---GPPVHLPSESFTLKYNRPFIFLAFDKY 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 105/366 (29%)
Serpina6NP_031644.1 serpinA6_CBG 28..397 CDD:381022 105/370 (28%)

Return to query results.
Submit another query.