DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpini1

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:408 Identity:122/408 - (29%)
Similarity:210/408 - (51%) Gaps:43/408 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSIILLGVWISAPEGLGNTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRT 69
            ||::.|...::.......||.:   ::..::..|....:|||::.||:||.||:|:...||:|.|
  Rat     7 LSLVALQSLVTGAAFPDETIAE---WSVNVYNHLRATGEDENILFSPLSIALAMGVMELGAQGST 68

  Fly    70 AAELQKTLHASAKES-KDGLAESYHNLLHSYIKSKT---VLEIANKVYTRQNLTVSSHFREVAQK 130
            ..|::   |:...|| |.|...|:.....|.:.::.   |::|||.::.:....::..|.::.:.
  Rat    69 LKEIR---HSMGYESLKSGEEFSFLRDFSSMVSAEEGQYVMKIANSLFVQNGFHINEEFLQMMKM 130

  Fly   131 YFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVESLEPD--TNVALVNAIYFKARWARPFN 193
            ||::||..:|||........||:||:..|.:.::.:|...:.|  |::||:||:|||..|...|.
  Rat   131 YFNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTHLALINAVYFKGNWKSQFR 195

  Fly   194 DEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKA------IELFFENINLTMWFILPNQ 252
            .|:||...|...:...:|:|.|:....:||.::.:...:|      :|:.:|...::|..:|..|
  Rat   196 PENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQ 260

  Fly   253 RSGLQALEQKLKGVDFNLLEDRW----QWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMF-SDA- 311
            ...|..||..||.   .|:|: |    :.|.|.||||:|..|.:.||:..|..:|::.:| .|| 
  Rat   261 EVPLATLEPLLKP---QLIEE-WANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDAN 321

  Fly   312 ----ADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFA 372
                :|...:|        ::|..||:||:|||.|.|||.||....:.....|.|:..| ||||.
  Rat   322 LTAMSDKKELF--------LSKAVHKSFIEVNEEGSEAAVASGMIAISRMAVLFPQVIV-DHPFL 377

  Fly   373 FIIRDKH--AVYFTGHIV 388
            |:|:::.  .:.|.|.::
  Rat   378 FLIKNRKTGTILFMGRVM 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 117/382 (31%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 119/392 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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