DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and serpinb11

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_002936466.1 Gene:serpinb11 / 100490487 XenbaseID:XB-GENE-6039640 Length:401 Species:Xenopus tropicalis


Alignment Length:404 Identity:129/404 - (31%)
Similarity:212/404 - (52%) Gaps:56/404 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQK-------------- 75
            |..|.|:.::|:.|.:..:::|:..||:||..||.|.:.|:...||.::||              
 Frog     6 KSINEFSLDIFKELNSSCENKNIFFSPMSISAALYLLHLGSREDTATQIQKVVRYPDVKKEGFFR 70

  Fly    76 ----TLHASAKES--KD----GLAESYHNLLHSYIKSKT------VLEIANKVYTRQNLTVSSHF 124
                |...|.:||  ||    |.....|:..|:.:...|      .|:|||.::.:.|......:
 Frog    71 RRCATQQRSNEESPGKDVSECGKVSDAHSKFHALLSKLTEDPKGVELQIANGMFAQMNFPFLQQY 135

  Fly   125 REVAQKYFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVE--SLEPDTNVALVNAIYFKAR 187
            .|.||..::::::.:||.:: |..|.||.||:.:|:.||:.:.|  ||:..|.:.||||||||..
 Frog   136 LECAQALYNAKLQNVDFEKD-ETRENINSWVESKTQGKIKDLFEKNSLDKRTALVLVNAIYFKGI 199

  Fly   188 WARPFNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQ 252
            |:.||.:..|:|..|::|:.....||.|:....:......||:|:.:||.::...|:|:.:|.|:
 Frog   200 WSNPFQEVHTKDAPFYVSKDVVKSVPMMYQSQKFNLGAIKELNAQILELPYQLGALSMFILLTNE 264

  Fly   253 RSGLQALEQKL------KGVDFNLLEDRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDA 311
            :.|||.:||:|      ||:. |:...:     :.||:|:|:.|...||...|..||:...||:|
 Frog   265 KFGLQKIEQQLSWNYLAKGMS-NMENTK-----LDVYIPRFRLEESLDLGSHLINMGMVDAFSEA 323

  Fly   312 -ADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMS--LPLDPKTFVADHPFAF 373
             |:.|.| .|.|:  .::|:.||.|::|||.|..||.|:   ||.::  :.:.|:.|.|||.|.|
 Frog   324 KANLSGI-SDVPL--YVSKIVHKAFVEVNEEGTVAAAAT---GVQIAPKMAVIPRVFKADHSFLF 382

  Fly   374 IIRD--KHAVYFTG 385
            .|:|  ...:.|.|
 Frog   383 FIKDNPNDTILFFG 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 128/401 (32%)
serpinb11XP_002936466.1 serpinB 7..398 CDD:381072 128/403 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.110

Return to query results.
Submit another query.