DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinb6c

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001369781.1 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:372 Identity:96/372 - (25%)
Similarity:181/372 - (48%) Gaps:21/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQ 97
            |.:|...:..|. ::||.:||.:|.|::.:..:||||.||.::.|.|.||...:.........:|
Mouse    13 ALNLLKILGEDR-SKNVFLSPISISSALVMVLLGAKGTTAIQITQALSLGKCSSSEDGDVHQGFQ 76

  Fly    98 QALTRDN------NFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRA 156
            ..|:..|      :.:.||.::..:..:...||:|...:.:::.:::|||... .:::...||..
Mouse    77 LLLSEVNKTGTQYSLKAANRLFGEKTFDILASFKDSCHKFYEAEMEELDFKGA-TEQSRQHINTW 140

  Fly   157 VATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWT 221
            ||.||..||.::|....::..|..::||.|.:...|:|.|..:.|.:..|:....:...|..|:.
Mouse   141 VAKKTEDKIKELLSPGTIHSNTPLILVNAVYFKGKWEKQFNKEDTREMPFKVSKNEEKPVQMMFQ 205

  Fly   222 LQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLL--AEIGAMSQQKV 284
            ...|....|..:..|::.|||...:.:|:::||:....|.::::.::.:..:  ..:..|..:||
Mouse   206 KSTFKMTYVEEISTKILLLPYVGNELNMIIMLPDEHVELSTVEKEITHEKFIEWTRLDRMKGEKV 270

  Fly   285 EVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD-GDFGNM---YRMFVSHFINAVEHKANVEVTEAG 345
            ||.||.|.:.....::....|||:...|... .||..:   ..:|:|:.|    ||:.|||.|.|
Mouse   271 EVFLPWFKLEENYDMKDVLCKLGMTDAFEEGRADFSGISSKQGLFLSNVI----HKSVVEVNEEG 331

  Fly   346 VDQPLETGL-LKGLFSRSKKFEADHPFVFAIKY--KDSIAFIGHIAN 389
            .:....|.: |||....:..|..:.||:|.|::  .:.|.|:|.:::
Mouse   332 SEATAATTIVLKGSSRSTPCFCVNRPFIFFIQHIKTNEILFLGRLSS 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 96/368 (26%)
Serpinb6cNP_001369781.1 serpin 2..379 CDD:422956 96/372 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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