DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and SRP3

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:371 Identity:102/371 - (27%)
Similarity:161/371 - (43%) Gaps:59/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NENVVISPATIQSSMALAFVGAKGQTAS-ELQQGLRLGPGD---------ADAV-SQRSGSYQQA 99
            :.||:.|||:|.|::.:...|..|...| ::...||....|         |..| :.||.:....
plant    28 DSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATGGPK 92

  Fly   100 LTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGK 164
            :|      .||.::|:::|.....|:|:.:..|.:....:||.....:...: :|..|...||..
plant    93 IT------AANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKE-VNSWVEHHTNNL 150

  Fly   165 ITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAE 229
            |.|:|....:...|..:..|.:|:..||::.|....|....|...:|.||.|..|.:.:| .|  
plant   151 IKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFMSSYEN-QY-- 212

  Fly   230 VNSLDA-KVVELPYQ------NPDFSMLLLLPNRKDGLRSLQQSLSGKN--LLAEIGAMSQQKVE 285
            |.:.|. ||:.||||      |..|||...||::||||..|.:.::...  |.:.|.....:..:
plant   213 VRAYDGFKVLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEK 277

  Fly   286 VLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPL 350
            ..:|||.:.||..:.....:||:.:|        :||            |||.||:.|.|.:...
plant   278 FRIPKFKIEFGFSVTSVLDRLGLRSM--------SMY------------HKACVEIDEEGAEAAA 322

  Fly   351 ET-----GLLKGLFSRSKK--FEADHPFVFAIKYK--DSIAFIGHI 387
            .|     |.........||  |.|||||:|.|:.:  .::.|:|.|
plant   323 ATADGDCGCSLDFVEPPKKIDFVADHPFLFLIREEKTGTVLFVGQI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 101/369 (27%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 102/371 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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