DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and SRP3

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:371 Identity:102/371 - (27%)
Similarity:161/371 - (43%) Gaps:59/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NENVVISPATIQSSMALAFVGAKGQTAS-ELQQGLRLGPGD---------ADAV-SQRSGSYQQA 99
            :.||:.|||:|.|::.:...|..|...| ::...||....|         |..| :.||.:....
plant    28 DSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATGGPK 92

  Fly   100 LTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGK 164
            :|      .||.::|:::|.....|:|:.:..|.:....:||.....:...: :|..|...||..
plant    93 IT------AANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKE-VNSWVEHHTNNL 150

  Fly   165 ITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAE 229
            |.|:|....:...|..:..|.:|:..||::.|....|....|...:|.||.|..|.:.:| .|  
plant   151 IKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFMSSYEN-QY-- 212

  Fly   230 VNSLDA-KVVELPYQ------NPDFSMLLLLPNRKDGLRSLQQSLSGKN--LLAEIGAMSQQKVE 285
            |.:.|. ||:.||||      |..|||...||::||||..|.:.::...  |.:.|.....:..:
plant   213 VRAYDGFKVLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEK 277

  Fly   286 VLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPL 350
            ..:|||.:.||..:.....:||:.:|        :||            |||.||:.|.|.:...
plant   278 FRIPKFKIEFGFSVTSVLDRLGLRSM--------SMY------------HKACVEIDEEGAEAAA 322

  Fly   351 ET-----GLLKGLFSRSKK--FEADHPFVFAIKYK--DSIAFIGHI 387
            .|     |.........||  |.|||||:|.|:.:  .::.|:|.|
plant   323 ATADGDCGCSLDFVEPPKKIDFVADHPFLFLIREEKTGTVLFVGQI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 102/371 (27%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 102/371 (27%)

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