DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and SERPIN1

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001320925.1 Gene:SERPIN1 / 841182 AraportID:AT1G47710 Length:418 Species:Arabidopsis thaliana


Alignment Length:421 Identity:110/421 - (26%)
Similarity:184/421 - (43%) Gaps:45/421 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLLLLATVSQSKTVGYDAAADRNLLAADLYNAVA---------ADHL------NENVVISPATI 56
            |.||.||.....|.| |.::..:.....|:..:::         |.|:      |.||:.|||:|
plant     2 CHLLRLALRRVRKFV-YQSSPPQPPAKMDVRESISLQNQVSMNLAKHVITTVSQNSNVIFSPASI 65

  Fly    57 QSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALTRDNN------FRLANNIYIN 115
            ...:::...|:.|.|..::...|:.  ...|.::..|.....|:..|.:      ..:||..:|:
plant    66 NVVLSIIAAGSAGATKDQILSFLKF--SSTDQLNSFSSEIVSAVLADGSANGGPKLSVANGAWID 128

  Fly   116 ENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEG 180
            ::|.||.||:.:.:..:.:..::.||.....:..|: :|.....:|||.||::|.....:..|:.
plant   129 KSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAE-VNSWAEKETNGLITEVLPEGSADSMTKL 192

  Fly   181 VIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDA-KVVELPY-Q 243
            :..|.:.:...|.:.|....|::..|....|..|....| |.:...|  |::.|. ||:.||| |
plant   193 IFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM-TSKKKQY--VSAYDGFKVLGLPYLQ 254

  Fly   244 NPD---FSMLLLLPNRKDGLRS-LQQSLSGKNLLAEIGAMSQQKV-EVLLPKFSVTFGLGLEGPF 303
            ..|   |||...||:..:||.. |.:.:|....|.......|.|| |..:|||..:||.......
plant   255 GQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPKFKFSFGFDASNVL 319

  Fly   304 KKLGVHTMFSRDGDFGNMY---RMFVSHFINAVEHKANVEVTEAGVD-QPLETGLLK--GLFSRS 362
            |.||:.:.||.:.....|.   .|..:..::.:.|||.:||.|.|.: .....|::|  ||....
plant   320 KGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVNEEGTEAAAASAGVIKLRGLLMEE 384

  Fly   363 KK--FEADHPFVFAI--KYKDSIAFIGHIAN 389
            .:  |.|||||:..:  .....:.|||.:.:
plant   385 DEIDFVADHPFLLVVTENITGVVLFIGQVVD 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 102/394 (26%)
SERPIN1NP_001320925.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.