DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and SRP2

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:415 Identity:102/415 - (24%)
Similarity:173/415 - (41%) Gaps:78/415 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLATVSQSKTVGYDAAADRN----LLAADLYNAVAADHLNENVVISPATIQS------------- 58
            |..|..:.|....:|..::|    ||...:.:|||.   |.|.|.|||:|.:             
plant    20 LSKTNKKQKIDMQEAMKNQNEVSLLLVGKVISAVAK---NSNCVFSPASINAVLTVTAANTDNKT 81

  Fly    59 --SMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALTRDNNFRLANNIYINENLEFK 121
              |..|:|:  |..:..|......    :..:|..:.||.    |........|.:::.::|...
plant    82 LRSFILSFL--KSSSTEETNAIFH----ELASVVFKDGSE----TGGPKIAAVNGVWMEQSLSCN 136

  Fly   122 GSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGV 186
            ..:.|:....|.::..|:||.....:...| :|...:..||..|.:||....:...|..:..|.:
plant   137 PDWEDLFLNFFKASFAKVDFRHKAEEVRLD-VNTWASRHTNDLIKEILPRGSVTSLTNWIYGNAL 200

  Fly   187 SYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDA-KVVELPYQ------N 244
            .:..||:|||....|..:.|...:|:||.|..|   :::....:.:.|. ||:.|||:      |
plant   201 YFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM---RSYEKQFIEAYDGFKVLRLPYRQGRDDTN 262

  Fly   245 PDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEV---LLPKFSVTFGLGLEGPFKKL 306
            .:|||.|.||::|..|.:|.:.::......: ..:.:.:|:|   .:|||.:.||......|   
plant   263 REFSMYLYLPDKKGELDNLLERITSNPGFLD-SHIPEYRVDVGDFRIPKFKIEFGFEASSVF--- 323

  Fly   307 GVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLL----KGLFSRSKK--F 365
                         |.:.:.||     :..||.:|:.|.|.:....|.::    ..|:...||  |
plant   324 -------------NDFELNVS-----LHQKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDF 370

  Fly   366 EADHPFVFAIKYKD---SIAFIGHI 387
            .|||||:|.|: :|   ::.|.|.|
plant   371 VADHPFLFLIR-EDKTGTLLFAGQI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 97/394 (25%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 98/399 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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