DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and serpina3m

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001025693.1 Gene:serpina3m / 595085 XenbaseID:XB-GENE-6453454 Length:413 Species:Xenopus tropicalis


Alignment Length:417 Identity:108/417 - (25%)
Similarity:193/417 - (46%) Gaps:46/417 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLLLLATVSQSKTVGYDAAADRNLL----------------AADLYNAVAADHLNE------NV 49
            ||:||:|.:.:|.......:.|...|                |.::|..||:..|.|      |:
 Frog     5 CLVLLIAVIVESDNHDDGISEDNKELSEEELKEILAQLNMHFAVNIYKQVASSALKEKNSEPKNI 69

  Fly    50 VISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQR-SGSYQQAL------TRDNNFR 107
            ..||.:|.:|:|:..:|||.:|..::...  |.|.:......: ..:::..|      .:|....
 Frog    70 FFSPVSISTSLAMLALGAKAETRHQILNS--LAPKETPIQEVKIHNAFKHLLQTLNKPKKDLKIT 132

  Fly   108 LANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAE 172
            :.|..::.|.|:|..||...|:|.:.:::...:|..|  |.....||..|..:|||||.:::|..
 Frog   133 VGNAAFVEEELKFLKSFAHEAERYYQADVFSTNFKNP--KDAEIQINNYVNNQTNGKIKELVRGP 195

  Fly   173 LLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKV 237
            .::  |:.::||.:.:...|:..|..|.|....|...:...|:|..|..:..|:....|.|...|
 Frog   196 SMD--TKLLLVNYILFKGEWESPFSPDFTRLSVFSIDNRTKVEVKMMSRMGRFDIFLDNELPCTV 258

  Fly   238 VELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGP 302
            ::|||.: |..|||::| ....::.::.:||...:|....:.|::.:.:.:||||::..|.|:..
 Frog   259 LKLPYID-DALMLLIMP-ELGKIQEVEAALSKDTILRWRNSTSKKFLRLYMPKFSISSSLKLKEI 321

  Fly   303 FKKLGVHTMFSRDGDFGNMY---RMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFSRSKK 364
            ...:|:..:||...||..:.   ::.:|..|    |||.::|.|.|.:....|.:....:|..|.
 Frog   322 LSDVGMSNIFSDQADFSGIVEDGKLTLSKVI----HKAVLDVDEKGTEAAAVTAVNVIRYSLLKS 382

  Fly   365 FEADHPFVFAI--KYKDSIAFIGHIAN 389
            .:.|.||:..|  |..|:|.|:|.|.|
 Frog   383 QKVDRPFLVVICSKQTDTILFMGRIVN 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 99/390 (25%)
serpina3mNP_001025693.1 SERPIN 43..407 CDD:320777 98/375 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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