DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Spn28F

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster


Alignment Length:393 Identity:118/393 - (30%)
Similarity:199/393 - (50%) Gaps:41/393 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLLLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQT 71
            |||||..:||..             .|.|.|..:|.::...|::.||.:::.::::|::||:.:|
  Fly     5 CLLLLATSVSCR-------------FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKT 56

  Fly    72 ASELQQGLRLGPGDADAVSQRSGSYQQALTRDN------NFRLANNIYINENLEFKGSFRDVAQR 130
            |.|::..|:| |.|...|:.:   |:..|::..      ...|||.||:|:..:...|:..:.:.
  Fly    57 AQEMRNVLKL-PDDKKEVAAK---YKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKD 117

  Fly   131 QFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLND--RTEGVIVNGVSYSAAWQ 193
            .|.:..:.:|...| ||.::. :|..|..:|.|||.|::.:   ||  :.|.:::|.:.:...|:
  Fly   118 SFMAEAEAIDIVDP-NKASSI-VNNWVDNQTRGKIKDLVSS---NDMSKMELIVLNAIYFKGQWE 177

  Fly   194 KAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKD 258
            ..|....|:||:||....:||.|:.|...|:|..|..:.|.||::||||:|...|||:.||::.|
  Fly   178 YKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD 242

  Fly   259 GLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYR 323
            ||..|::.:.|..     ..:|:..|.:.||||.:.|...|......:|:...|.:..||.::..
  Fly   243 GLSELEKKIVGFK-----PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVE 302

  Fly   324 MFVSHFINAVEHKANVEVTEAGVDQPLETGLL-----KGLFSRSKKFEADHPFVFAIKYKDSIAF 383
            ....| :..|.|||.:||.|.|.:....|.||     ..:.|....|.|||||.:.|:.:::|.|
  Fly   303 NSNVH-VKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYF 366

  Fly   384 IGH 386
            .||
  Fly   367 QGH 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 111/370 (30%)
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 112/384 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446350
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.