DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn42Da

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster


Alignment Length:385 Identity:122/385 - (31%)
Similarity:204/385 - (52%) Gaps:15/385 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQ 77
            |.|:.:.....:.|....|.:.::|..::.....||:|.||.:||:..|:|.:||:.:||::|.|
  Fly    29 ADVTMADAAHQEFARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQ 93

  Fly    78 GLRLGPGDADAVSQRSGSYQQALT--RDNN-FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKL 139
            ||.|...|.:.::.   |:.|.|.  :|:. .|:||.|::.:..:.:..|..:..:||.|....:
  Fly    94 GLGLASSDPEQIAH---SFHQVLAAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSV 155

  Fly   140 DFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKR 204
            ||..  |.:.|..||..|..:||..|.|::.|::||..:..|:||.:.:...||..|....|...
  Fly   156 DFSK--NVQAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPD 218

  Fly   205 SFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSG 269
            :|.....::|:|..|...:.|.||::.:|||..:||||::.|.|||::|||.|.||.:|::.|..
  Fly   219 TFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRL 283

  Fly   270 KNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVE 334
            ..|.....::.:.||.:.||:|...|.:.|...|:|||:..|||...:||.|.:......::|:.
  Fly   284 TTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAII 348

  Fly   335 HKANVEVTEAGVDQPLETGLL----KGLFSRSK--KFEADHPFVFAIKY-KDSIAFIGHI 387
            |||.:||.|.|.:....||:.    :.:.|..:  :|.|||||.:.:.: ||...|.|.:
  Fly   349 HKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQKDLPLFWGSV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 119/371 (32%)
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 118/366 (32%)

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