DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn88Ea

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster


Alignment Length:425 Identity:108/425 - (25%)
Similarity:174/425 - (40%) Gaps:48/425 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVIISCLLLLLATVSQSKTVGYDAAA---DRNL--------LAADLYNAVAADHLNENVVISPA 54
            |.::...|:.:|..::.:...|.:..|   |:.|        .|..:.|.:.....||||..||.
  Fly     1 MHILSISLMAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPY 65

  Fly    55 TIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALTRDN-------NFRLANNI 112
            :...::.||:.|:.|.|..||.:.|.|...|:..| .||....:.:.|..       .|..|:.|
  Fly    66 STYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV-VRSAYILEKMNRKERQSKMPLEFSSADRI 129

  Fly   113 YINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDR 177
            :...:|.    ..:.|:.:....:.::|| ....:.:...||..:|.:|:.:|.::|.|:.:..|
  Fly   130 FFANDLH----VTECARNRLAEEVQQIDF-KSQTEESRKQINDWIAKQTHDQIRNMLSADEITPR 189

  Fly   178 TEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPY 242
            |..|:.|.......|...|:.:||....|.|.......|..|.....|.......|.|.|::|||
  Fly   190 TRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPY 254

  Fly   243 ---------------QNPDFSMLLLLPN-RKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKF 291
                           :|.|.||:|:||. ..:.|..:...|:..:|...:.....:::||.||||
  Fly   255 RTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKF 319

  Fly   292 SVTFGLGLEGPFKKLGVHTMFSRD-GDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLL 355
            .....|.|.....|:||..||... ..|.::....:|  |...:|.|.::|.|.|......|.|.
  Fly   320 EFEQRLELNPILAKMGVSKMFDESVATFDDLTSETIS--IGDSKHVAKIKVDEEGSTAAAATVLF 382

  Fly   356 KGLFSR---SKKFEADHPFVFAI--KYKDSIAFIG 385
            ....:|   ..|||.:|||:|.|  :...||.|.|
  Fly   383 TYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 102/393 (26%)
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 101/387 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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