DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn55B

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:356 Identity:114/356 - (32%)
Similarity:189/356 - (53%) Gaps:8/356 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQ 98
            ::|:..::|..|.||||.||.:||:.:||||.|::|:||.|:.:.|.........|:|......:
  Fly    17 SELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFVLE 81

  Fly    99 ALTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNG 163
            .....|..|:||.:|:.|..:.|.:::...:.|:.|..:.::|  ..|...|..||..|..||.|
  Fly    82 KYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINF--ALNDAAAQAINAWVNAKTQG 144

  Fly   164 KITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYA 228
            |||:::.|:..:|.|..|::|.:.:..:|...|..::||:..|..|..:.||::.|.....|||.
  Fly   145 KITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYG 209

  Fly   229 EVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSV 293
            ....|....:|:|||:.|.||.:|||..:.|:.:|.:.|...||:.....::.::|.|..|||.|
  Fly   210 FFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKFKV 274

  Fly   294 TFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGL 358
            .:.|.|....|:||:..||:...:|.|:.......|::.|.|||.:||.|.|.:....||::  :
  Fly   275 DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMI--M 337

  Fly   359 FSRSK----KFEADHPFVFAIKYKDSIAFIG 385
            .:|..    :|:||.||::.|..|.:|.|.|
  Fly   338 MTRMMTFPLQFQADRPFLYVIWNKKNILFAG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 114/356 (32%)
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 114/356 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449385
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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