DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and serpina3

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:387 Identity:92/387 - (23%)
Similarity:180/387 - (46%) Gaps:33/387 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VGYDAAADRNL-LAADLYNAVAA------DHLNENVVISPATIQSSMALAFVGAKGQTASELQQG 78
            :..:|....|: .|.:||..:..      :...:|:|.||.:|.::.::..:|||.::..::..|
 Frog    35 IAQEALGSANIDFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSG 99

  Fly    79 LRLGPGDA--DAVSQRSGSYQQALTR---DNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDK 138
            |.|.....  :.:.:......|.|.|   |...::.|.:::.:.|:...||....:..:.:.|  
 Frog   100 LSLNQTQVPEEDMHEAFEHLLQVLNRPKSDLQVKIGNAVFVEDTLKILDSFVQEIEHHYHAEI-- 162

  Fly   139 LDFHPPYNKRTADG---INRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDK 200
               .|.:.|..|:.   ||..|..||.|:|.::::.  |::.|:.|::|.:.::|.||..|....
 Frog   163 ---FPSHFKNPAEAEKQINDFVNNKTEGRIQELVKD--LSEATKLVVINFILFNAEWQNPFSSFF 222

  Fly   201 TEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQ 265
            |..|.|......:|:|..|.....:.:.:...:...|::|||:| :.|||:::| ....:..:::
 Frog   223 THSRQFSVDENTTVEVQMMSKTDLYQFYKDEKIPCSVLQLPYKN-NASMLIIVP-ELGKIHEVEE 285

  Fly   266 SLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNM---YRMFVS 327
            :||.:.|.....:..:...|:.|||||::..|.|:.....:|:..:|:...||..:   .|:.:|
 Frog   286 ALSVETLKRWTSSAEKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFSGISENSRLKLS 350

  Fly   328 HFINAVEHKANVEVTEAGVDQPLETGLLKGLFSRSKKFEADHPFVFAIKYKD--SIAFIGHI 387
                .|.|||.:.|.|.|.:....:.:...|.|...:|..|.||:..|..::  ||.|:..:
 Frog   351 ----KVVHKAVLNVAENGTEAAAASAVEGVLTSLMVQFVVDKPFITLICSQEPYSILFMSRV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 91/376 (24%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 91/379 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.