DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and serpinc1

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001008153.1 Gene:serpinc1 / 493515 XenbaseID:XB-GENE-975782 Length:456 Species:Xenopus tropicalis


Alignment Length:399 Identity:95/399 - (23%)
Similarity:178/399 - (44%) Gaps:50/399 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YDAAADRNLLAADLYNAVAADHLN-ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDA 86
            |:.:......|...|..:|....| ||:.:||.:|..:..:|.:||...|..||.:....     
 Frog    72 YELSQANAKFAIAFYKNLADSKQNTENIFMSPLSISQAFTMAKLGACNNTLKELMEVFYF----- 131

  Fly    87 DAVSQRSGSYQQALTRDNNFRL------------ANNIYINENLEFKGSFRDVAQRQFDSNIDKL 139
            |.:|:|:...........|.||            .|.::..::|.|..:::|:::..:.:.:..|
 Frog   132 DTISERASDQIHYFFAKLNCRLFRKANKSSELVSVNRLFGEKSLTFNETYQDISELVYGAKLLPL 196

  Fly   140 DF--HPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTE 202
            :|  .|..::..   ||..|:.||..:|||::...::...|..|::|.:.:...|:..|..:.|:
 Frog   197 NFKEKPELSREI---INNWVSDKTEKRITDVIPVGVITPDTVLVLINAIYFKGLWKSKFNSENTK 258

  Fly   203 KRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSL 267
            ...|...........||:....|.|:.......:|:||||:..|.:|:|:||:.:..|..::|:|
 Frog   259 MEQFYPDESNHCLAATMYQEGIFRYSSFKDDGVQVLELPYKGDDITMVLVLPSPETPLMKVEQNL 323

  Fly   268 SGKNLLAEIGAMSQQ----KVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGD------FGNMY 322
            :    |.::|...|:    ::.|.||:|.|.....::...:::|:..:|..:..      .|...
 Frog   324 T----LEKLGNWLQKSRELQLSVYLPRFRVEDSFSVKEKLQQMGLVDLFDPNSAKLPGIVAGGRT 384

  Fly   323 RMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFSRSKK-----FEADHPFVFAIKYK--DS 380
            .::||...    |||.:||.|.|.:....|.::  |..||..     |.|:.||:..|:..  :|
 Frog   385 DLYVSDAF----HKAFLEVNEEGSEAAASTAVI--LTGRSLNLNRITFRANRPFLVFIREVAINS 443

  Fly   381 IAFIGHIAN 389
            :.|:|.:||
 Frog   444 VLFMGRVAN 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 94/395 (24%)
serpinc1NP_001008153.1 serpinC1_AT3 61..455 CDD:381002 95/399 (24%)

Return to query results.
Submit another query.