DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn43Aa

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:398 Identity:138/398 - (34%)
Similarity:209/398 - (52%) Gaps:29/398 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTA 72
            ::||...:|..:.:| :...||||.|.:|:..:|.|..:|||:|||.:||.::.||:.||:|:||
  Fly     7 IILLGVWISAPEGLG-NTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTA 70

  Fly    73 SELQQGLRLGPGDADAVSQRSG---SYQQAL----TRDNNFRLANNIYINENLEFKGSFRDVAQR 130
            :|||:.|.     |.|...:.|   ||...|    .......:||.:|..:||.....||:|||:
  Fly    71 AELQKTLH-----ASAKESKDGLAESYHNLLHSYIKSKTVLEIANKVYTRQNLTVSSHFREVAQK 130

  Fly   131 QFDSNIDKLDFHPPYNKRT--ADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQ 193
            .|||.::.|||    ::.|  .:.|||.|..:|..||..::  |.|...|...:||.:.:.|.|.
  Fly   131 YFDSEVEPLDF----SRETEAVEQINRWVKQQTENKIERVV--ESLEPDTNVALVNAIYFKARWA 189

  Fly   194 KAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKD 258
            :.|..:.|..|.|.....:|::|.||:....:.||:...||||.:||.::|.:.:|..:|||::.
  Fly   190 RPFNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRS 254

  Fly   259 GLRSLQQSLSGK--NLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNM 321
            ||::|:|.|.|.  |||.:  ....|.|.|.||||...|...|.....|:|:..|||...||.|:
  Fly   255 GLQALEQKLKGVDFNLLED--RWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNI 317

  Fly   322 YR-MFVSHFINAVEHKANVEVTEAGVD---QPLETGLLKGLFSRSKKFEADHPFVFAIKYKDSIA 382
            :: ..:...|..|:||..::|.|.|.:   .....|:...|....|.|.|||||.|.|:.|.::.
  Fly   318 FQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRDKHAVY 382

  Fly   383 FIGHIANY 390
            |.|||..:
  Fly   383 FTGHIVKF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 134/377 (36%)
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 133/375 (35%)

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