DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn100A

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster


Alignment Length:411 Identity:93/411 - (22%)
Similarity:153/411 - (37%) Gaps:112/411 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TVSQSKTVGYDAAADRNLLAADLYNAVAAD-------HLNENVVISPATIQSSMALA-FVGAKGQ 70
            |:|..|....|.||:.|  .|:......:|       :|.||     .|:|....|| .:.|...
  Fly   267 TLSVEKQEKPDMAAEEN--PAEKQQNKRSDQEESQIKNLEEN-----ETVQEEEKLAKIMAAPAL 324

  Fly    71 TASELQQGLRLGPGDADAVSQRSGSYQQALTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSN 135
            ||.|.:: :||             ..|         :|.|.:        |.:.:|.|    |..
  Fly   325 TAGEPEK-VRL-------------PLQ---------KLENAV--------KTAAKDGA----DEI 354

  Fly   136 IDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEG-----VIVNGVSYSAAWQKA 195
            :..|:.|.|...|    :|.|.:......||..|.|..:..|:.|     ::.||:.|..:|...
  Fly   355 MLALESHLPSVSR----VNGARSLFQQDDITSALSANSITGRSAGSKSKMLLFNGLYYRGSWANP 415

  Fly   196 F--RLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKD 258
            |  ..|.:::..|.|.. .:||...|.....|..|::..:.|:|:.|||:...:::.::||:..:
  Fly   416 FYQLRDGSDEFFFMTNE-DAVKAPMMHARGKFQVADLPQVKARVLSLPYETSRYALCIVLPDETE 479

  Fly   259 GLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSR--------- 314
            ||..:...|...:.|........:::.:.:|||.|......|...|::|:..:|||         
  Fly   480 GLSDVISQLQTSDFLLAKKQFQMKELHISMPKFQVEETSRSEAMLKQMGLKKVFSRTEAQLSLLS 544

  Fly   315 -DGDFGNMYRMFVSHFINAVEHKANVEVTEAG------------------------VDQPLETGL 354
             |.|      :.|...:..|    ||.|.|.|                        |.:|...  
  Fly   545 EDPD------VHVDEIVQFV----NVRVDEGGSSANSLSAATMQARTPSVESTVLPVPEPEPE-- 597

  Fly   355 LKGLFSRSKKFEADHPFVFAI 375
            |.|:    ::||.:.||.:.|
  Fly   598 LPGV----ERFEVNRPFAYFI 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 88/398 (22%)
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 58/252 (23%)
Blue background indicates that the domain is not in the aligned region.

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