DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Serpinb6e

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001039000.2 Gene:Serpinb6e / 435350 MGIID:2667778 Length:429 Species:Mus musculus


Alignment Length:412 Identity:116/412 - (28%)
Similarity:193/412 - (46%) Gaps:43/412 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IISCLLLLLATVSQSKTVGYDAAADRN-LLAADLYNAVAADHLNENVVISPATIQSSMALAFVGA 67
            |:.|:.::|..:..|:....|:..:.| .....|:..:..|. ::||..|.:::.||:||..:||
Mouse    34 ILDCVFIMLIVILHSRYTIMDSLLEANATFTLKLFRVLGEDS-SKNVFFSSSSMFSSLALILMGA 97

  Fly    68 KGQTASELQQGLRL---GPGDADAVSQRSGSYQQALTRDNN------FRLANNIYINENLEFKGS 123
            .|.|||::.|.|.|   ..|.|| |.|   .:|..||..|.      .|.||.|:.:.|.:...|
Mouse    98 NGTTASQISQVLSLDKCSNGGAD-VQQ---GFQSLLTEVNKTDTGHMLRRANKIFSDNNFDIMES 158

  Fly   124 FRDVAQRQFDSNIDKLDFHPPYNKRTAD----GINRAVATKTNGKITDILRAELLNDRTEGVIVN 184
            |::...:.:...|:||||     |.|.:    .||..||.||...|.::|....:|..|..::||
Mouse   159 FKESCYKLYRVEIEKLDF-----KGTPEQCRQHINAWVAKKTKDVIRELLSLYTVNSNTRLILVN 218

  Fly   185 GVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFN--YAEVNSLDAKVVELPYQNPDF 247
            ...:...|:|.|..:.|.:..|:....:...|..|.....|.  |||  .:...:|.|||.:.:.
Mouse   219 ATYFKGKWEKQFNKEDTREMPFKVSKNEKKTVQMMSKKSTFKTYYAE--EISTTIVFLPYTDKEL 281

  Fly   248 SMLLLLPNRKDGLRSLQQSLSGKNLL--AEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHT 310
            ||:::||:.:..|..::..:|.|.|:  ..:..|.:::|:|.||:|.:.....::....|||:..
Mouse   282 SMIIMLPDEQVELSMVENQISYKKLIQWTRLVKMEEEEVQVFLPRFKLEATYDMKDVLCKLGMTD 346

  Fly   311 MFSRD-GDFGNMYRMFVSH----FINAVEHKANVEVTEAGVDQPLETGLLK-GLFSRSKKFEADH 369
            .|... .||..     :|.    |::.|.||:.|||.|.|.:..:.|.::. |.....:...||.
Mouse   347 AFEESRADFSG-----ISSKKGLFLSNVVHKSFVEVNEEGTEAAVATEIVTVGSPLTQRCLIADR 406

  Fly   370 PFVFAIKYKDS--IAFIGHIAN 389
            ||:|.|:...|  |.|:|..::
Mouse   407 PFLFLIQGDKSKEILFLGRFSS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 111/382 (29%)
Serpinb6eNP_001039000.2 serpin 53..429 CDD:393296 112/393 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.