DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Spn88Eb

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:377 Identity:101/377 - (26%)
Similarity:162/377 - (42%) Gaps:56/377 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALT------RDNNF 106
            |:..||.:..:::.||:..:..||..||.|.|.||    .|:::     ||.|.      |.:.|
  Fly    57 NLFFSPFSTYNALLLAYFSSSEQTERELAQALNLG----WALNK-----QQVLVSYTLAQRQDEF 112

  Fly   107 R---------LANNIYINENLEFKGSFRDV---AQRQFDSNIDKLDFHPPYNKRTADGINRAVAT 159
            |         .||.|:::..:.....|..:   |.::.|...|     |....:.   ||..:|.
  Fly   113 RWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKND-----PETGLKE---INDWIAD 169

  Fly   160 KTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQN 224
            ||:.:|.|:|.:|.:...|..|:.|.......|...|::::|..:.|.....:...|..|.....
  Fly   170 KTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGA 234

  Fly   225 FNYAEVNSLDAKVVELPYQ---------------NPDFSMLLLLPN-RKDGLRSLQQSLSGKNLL 273
            |.......|.:::::|||:               ..|.||:::||| .|..|..:...|:..::.
  Fly   235 FKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVK 299

  Fly   274 AEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKAN 338
            ........||:|:.||||.....|.|......:||:|||:|:..||::....:|..|:..:|.|.
  Fly   300 KWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAK 364

  Fly   339 VEVTEAGVDQPLETGLLKGLFSRS---KKFEADHPFVFAI--KYKDSIAFIG 385
            ::|.|.|......|.||....||.   .||..:|||||.|  :..|:|.|.|
  Fly   365 IKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 101/377 (27%)
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 101/377 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446271
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.