DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn85F

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster


Alignment Length:440 Identity:88/440 - (20%)
Similarity:154/440 - (35%) Gaps:126/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TVSQSKTVGYDAAA-----DRNLLAADLYNAVAADHLNENVV----------------------- 50
            |.:.:.|.|.:.||     |.   ||:|.:|..|:..:|.::                       
  Fly   256 TEAPAATSGEEEAAEPAGEDE---AAELVSAFVAEEDSEPLLRIQKARVSRLPTSKLQAPLKHSN 317

  Fly    51 -ISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALTRDNNFRLANNIYI 114
             |:|..|....|..........|.::.:  |..||....:|..:.|.|.|           ||.:
  Fly   318 PITPKPIYLPSARTVAMPMPMMARQVAE--RKPPGTRQVISIIAPSVQPA-----------NISV 369

  Fly   115 NENLEFKGSFRDV--AQRQFDSNI-------------DKLDFHPPYNKRTADGINRAVATKTNGK 164
            ....:.....|..  |.:..|:|:             ..|.|.||        :..|.|     .
  Fly   370 TRKTKTARYKRHAIPAYKDLDANLFLTLFNPHTHVPHHPLHFPPP--------VPAAFA-----P 421

  Fly   165 ITDILRAELLNDRTEGV------IVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQ 223
            ||:......:.:..||.      :::.|.|                     .|....|.|.:.:.
  Fly   422 ITNDFEPHYIGEAAEGKSNYNTDVISHVFY---------------------LGNQQVVHTTFKVY 465

  Fly   224 N----FNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLS-GKNLLAEIGAMSQQK 283
            |    :.|.|  .|...|:||....|::::::|||:....:.:...||. |..|......:..:.
  Fly   466 NAVLYYKYFE--HLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQLKPRW 528

  Fly   284 VEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD-GDFGNMYR---MFVSHFINAVEHKANVEVTEA 344
            |:.::|.|.:...:.|....:.:|:..:|..: .||..|..   ::|.|    :|...:|.:...
  Fly   529 VQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRH----IEQSIDVTIRTH 589

  Fly   345 GVDQPLETGLLK---GLFSRSKKFEADHPFVFAIKYKD-SIAFI-GHIAN 389
            .::|      ||   |..|:..:...:|||:|.|..:| .:|.: |.|.|
  Fly   590 PINQ------LKRNYGAQSKPIQISVNHPFLFFIVDRDLDVAVMSGRILN 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 80/415 (19%)
Spn85FNP_649965.2 SERPIN 88..>204 CDD:294093
SERPIN <450..634 CDD:294093 47/217 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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