DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinb1c

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:389 Identity:107/389 - (27%)
Similarity:186/389 - (47%) Gaps:33/389 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPG 84
            |:|..::|: ||.|.:|::.:...:...|.:.||.:|.|::|:.::||:|.||::|.:.|.....
Mouse    33 TMGQLSSAN-NLFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHFDSA 96

  Fly    85 DADAVSQRSGSYQQALTRD-------NNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDF- 141
            : |..||     .|:||.:       :..:|||.:|..:...|...:....|:.:.:::..:|| 
Mouse    97 E-DIHSQ-----FQSLTAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSADLALVDFQ 155

  Fly   142 HPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSF 206
            |...:.|..  ||:.|..:|..||.::....:::..|:.|:||...:...|||.|....|....|
Mouse   156 HASEDARKE--INQWVKGQTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTTDAPF 218

  Fly   207 RTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLP----NRKDGLRSLQQSL 267
            |.....:..|..|:...|..:..:..|..||:|:|||..:.||::|||    :...||..:::.|
Mouse   219 RLSKKVTKTVKMMYLKNNLPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQL 283

  Fly   268 SGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD-GDFGNM---YRMFVSH 328
            :.:. |.|...:....|.|.||||.:.....|.....:|||..:||.. .|...|   ..:|:|.
Mouse   284 TLEK-LQECENLQNIDVCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKADLSGMSGSRDLFISK 347

  Fly   329 FINAVEHKANVEVTEAGVD-QPLETGLLKGLFSRSKKFEADHPFVFAIKYKDS--IAFIGHIAN 389
            .:    ||:.|||.|.|.: .....|.:.|......:|..||||:|.|::..:  :.|:|.:.:
Mouse   348 IV----HKSYVEVNEEGTETDAAMPGTVVGCCLMPMEFTVDHPFLFFIRHNPTAHVLFLGRVCS 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 104/375 (28%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 106/388 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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