DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Serpina11

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_955018.2 Gene:Serpina11 / 380780 MGIID:2685741 Length:427 Species:Mus musculus


Alignment Length:401 Identity:83/401 - (20%)
Similarity:170/401 - (42%) Gaps:51/401 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AADRNLLAADLYNAVA--------------ADHLNENVVISPATIQSSMALAFVGAKGQTASELQ 76
            |:.::|..|..|:.|.              |:.:..|::.||.::.||:||..:||...|.:::.
Mouse    41 ASHQSLEPAPAYHKVTPTITNFALRLYKQLAEEVAGNILFSPVSLSSSLALLSLGAHADTQTQIL 105

  Fly    77 QGLRLGPGDADAVSQRSGSYQQALTRD-----NNFRLANNIYINENLEFKGSFRDVAQRQFDSNI 136
            :.|.....:..|.....|......|.|     ...:|.:.::::..|:.:..|.|.|:..:.:  
Mouse   106 ESLGFNLTETPAADVHRGFQSLLHTLDLPSPKLELKLGHFLFLDRQLKPQQRFLDSAKELYGA-- 168

  Fly   137 DKLDFHPPYNKRTADG--INRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLD 199
              |.|...:.:..|.|  ||..|..:|.|::...| .|..:| |..|::|.:.:.|..:..|...
Mouse   169 --LAFSANFTEAAATGQQINDLVRKQTYGQVVGCL-PEFSHD-TLMVLLNYIFFKAKCKHPFDRY 229

  Fly   200 KTEKR-SFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSL 263
            :|.|: ||.......:::..|...:...:.........|:::.|..... :||:||: ...::.:
Mouse   230 QTRKQESFSLDQRTPLRIPMMRQKEMHRFLYDQEASCTVLQIEYSGTAL-LLLVLPD-PGKMQQV 292

  Fly   264 QQSLS-------GKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNM 321
            :.:|.       |:..|..:       :::.||:||::....||.....:|:..:|..:.|...:
Mouse   293 EAALQPETLRRWGQRFLPSL-------LDLHLPRFSISATYNLEEILPLIGLGNLFDMEADLSGI 350

  Fly   322 YRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKG----LFSRSKKFEADHPFVFAI--KYKDS 380
            ... ::..::.|.|||.|::.|.|.:....:|||..    ..:.:.:...:.||:..:  ....|
Mouse   351 MGQ-LNKTVSRVSHKAIVDMNEKGTEAAAASGLLSQPPALNMTSAPQAHYNRPFLLLLWEVTTQS 414

  Fly   381 IAFIGHIANYA 391
            :.|:|.:.|.|
Mouse   415 LLFLGKVVNPA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 80/391 (20%)
Serpina11NP_955018.2 SERPIN 58..421 CDD:294093 76/378 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.