DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinb6b

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:398 Identity:106/398 - (26%)
Similarity:184/398 - (46%) Gaps:54/398 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRL-- 81
            ||:|.|:                    ::||:.||.:|.|.:|:.|:||||.||.::.|.|.|  
  Rat    17 KTLGEDS--------------------SKNVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDK 61

  Fly    82 --GPGDADAVSQRSGSYQQALTRDNN------FRLANNIYINENLEFKGSFRDVAQRQFDSNIDK 138
              |.|..| |.|   .:|..|.:.|.      .:.||.::..:..:...||:|..::.:::.:::
  Rat    62 CSGRGSRD-VHQ---GFQSLLAKVNKTGTQYLLKTANRLFGEKTFDILASFKDACRKFYEAEMEE 122

  Fly   139 LDFH-PPYNKRTADGINRAVATKTNG-----------KITDILRAELLNDRTEGVIVNGVSYSAA 191
            |||. .|...|  ..||..||.||.|           |||::|.:..:|..|..|:||.:.:...
  Rat   123 LDFKGAPEQSR--QHINTWVAKKTEGQSISLNWNSQKKITELLSSGSVNANTPLVLVNAIYFKGN 185

  Fly   192 WQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNR 256
            |:|.|..:.|::..|:....:...|..|:....|....|..:...::.|||...:.:|:::||:.
  Rat   186 WKKQFNKEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNMIIMLPDE 250

  Fly   257 KDGLRSLQQSLSGKNLL--AEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD-GDF 318
            ...||.:::.::.|..:  ..:..|.:::|||.||||.:.....::....:||:...|.:. .||
  Rat   251 HIELRMVEKEITYKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADF 315

  Fly   319 GNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFSRSKKFEADHPFVFAIKYK--DSI 381
            ..:... ...|::.|.||:.|||.|.|.:....|............|.|:|||:|.|::.  :.|
  Rat   316 SGIASK-EGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCMVPYFCANHPFLFFIQHSRTNGI 379

  Fly   382 AFIGHIAN 389
            .|.|..::
  Rat   380 VFCGRFSS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 102/390 (26%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:476815 106/398 (27%)

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