DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Spn43Ad

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster


Alignment Length:404 Identity:100/404 - (24%)
Similarity:182/404 - (45%) Gaps:22/404 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVIISCLLLLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVG 66
            |:::...:.|...|.........|:...|.....|...:.....:.|||:||..||::::|.:..
  Fly     9 ALLVGLAIALTLPVDGELLARSPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAE 73

  Fly    67 AKGQTASELQQGLRLGPGDADAVSQRS-----GSYQQALTRDNNFRLANNIYINE--NLEFKGSF 124
            :..:..|:|:|.|.|.......::.:.     ...:|:.......||.:::|..:  ...|:..|
  Fly    74 SSSEYGSQLRQALELTHASHPKLAVQDFETLLTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEF 138

  Fly   125 RDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRA----ELLNDRTEGVIVNG 185
            ..:|.| ......:|.:....|  .|..||.|..:::|..:.:::.|    .|....|..:.|:|
  Fly   139 ETLAAR-MGVGCHRLSWESASN--AAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSG 200

  Fly   186 VSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSML 250
            |::.|.|..||...:|:..:|..|..:...||.|:....:.||||.:|||:::|:|:...|..||
  Fly   201 VTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRML 265

  Fly   251 LLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD 315
            ::.|||.|||..|::.|:..:|......:.::||.:.|||..|.....|:...::||:..:|:.:
  Fly   266 IVFPNRPDGLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSE 330

  Fly   316 GDFGNMYRMFVSHF---INAVEHKANVEVTEAG--VDQPLETGLLKGLFSRSKKFEADHPFVFAI 375
            .....::...:|..   :.||.....:|:.|.|  .|.....|   .||.|:.....:|||.:||
  Fly   331 VHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSFG---DLFRRALPLVINHPFFYAI 392

  Fly   376 KYKDSIAFIGHIAN 389
            ....::...|||.:
  Fly   393 GNGKTLLLSGHIVD 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 96/379 (25%)
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 96/379 (25%)

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