DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Spn28Da

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:364 Identity:87/364 - (23%)
Similarity:160/364 - (43%) Gaps:23/364 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQAL 100
            ||.:...|:...|::.||..::..|::..:||.|.||:||:..|.| |.|...|:.   .|.:.|
  Fly    21 LYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNL-PEDKKNVAT---IYDKLL 81

  Fly   101 TRDNN------FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVAT 159
            |:...      ..|||.:::||.:.....:..:..:.|.:..:.:....  ..:.|..||..|..
  Fly    82 TKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLAD--RLKAAWAINDWVLD 144

  Fly   160 KTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQN 224
            :|...:.||:....|......|::|...:...|:..|....|:.:.|.......|.|:.|..:..
  Fly   145 QTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGR 209

  Fly   225 FNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLP 289
            |. ...:::| :::|||:...:.||:::||.....|...:.::.....:    .:::..|.|.||
  Fly   210 FK-MRTSTID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQI----VLTEMDVHVQLP 268

  Fly   290 KFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQ-PLETG 353
            ||.:.|.:.|....|.:|:..:|:...|...:.....:. |:.|.|||.:|:.|.|... .....
  Fly   269 KFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTR-ISQVVHKAFIEIDEEGGSAGSASAS 332

  Fly   354 LLKGLFSRSKK---FEADHPFVFAIKYKDSIAFIGHIAN 389
            .::||...:..   |..:.||||.|:..|:|.|.|.:.:
  Fly   333 PIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVD 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 87/364 (24%)
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 87/364 (24%)

Return to query results.
Submit another query.