DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina1f

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001101524.1 Gene:Serpina1f / 314406 RGDID:1307899 Length:412 Species:Rattus norvegicus


Alignment Length:436 Identity:85/436 - (19%)
Similarity:176/436 - (40%) Gaps:85/436 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVIISCLLLLLATVSQSKTVGYDAAADRNL--------------LAADLYNAVAADHLNENVVI 51
            :.|.:.|||.:      :||...|...|.|:              ::..|:..:|...:|.|::.
  Rat    12 LLVGLCCLLPI------TKTKYEDLYEDPNIDPFQCRKVALTISNISITLFKEMAQLSVNGNILF 70

  Fly    52 SPATIQSSMALAFVGAKGQTASELQQGLRL---GPGDAD----------AVSQ-------RSGSY 96
            ||..:.:::::..:||||..:..:.:.|||   |..:|:          |:.|       :||| 
  Rat    71 SPIRVIAAISMLSLGAKGNESKRILEILRLNKTGLPEAEIHKCFRYLLRAIHQPEQLSPLKSGS- 134

  Fly    97 QQALTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKT 161
                          .::|:::|.....|.:..:..:.|:|..::|..  .:|....||..:.||:
  Rat   135 --------------GVFIHQDLTPVDKFVEGVKNLYHSDIVSINFTD--CRRAKTQINNYMMTKS 183

  Fly   162 NGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFN 226
            |.:|.:|:: .|.|| |...:||.:.::|.....|.....:::.:....|.::||..:..:...:
  Rat   184 NKEIKNIVK-NLEND-TYMAVVNYIIWNAKINSDFGCRSVKQKDYHLEQGMTIKVPMIHIVDLNH 246

  Fly   227 YAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKF 291
            ...|..|.:.|:.......:|:...::|:... ::.::|.|:..:........:.:.|.:..|:.
  Rat   247 LFRVEDLSSTVLVFTLLASNFTTYFIIPDIGQ-MQKVEQRLTYPHFRRMRRQSNLRMVNLETPEL 310

  Fly   292 SVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLK 356
            |::....:|.....||:..:|:.|.:...:....:......|. |..:.:.:.| .:|       
  Rat   311 SLSETHDVESMMNLLGITYVFNNDANSSAVMNDTLQKSFKMVS-KVKLTIDDKG-SKP------- 366

  Fly   357 GLFSRSKKFEAD-----------HPFVFAIK--YKDSIAFIGHIAN 389
               .||..|:.|           .||:..||  ..|...|:|.:.|
  Rat   367 ---GRSTCFKNDGSVDVGYVQFNRPFLIFIKDPTNDVPLFLGRVVN 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 78/410 (19%)
Serpina1fNP_001101524.1 serpin 47..410 CDD:476815 76/395 (19%)

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