DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinb3

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:366 Identity:105/366 - (28%)
Similarity:176/366 - (48%) Gaps:26/366 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLG------------PGDADAVSQRSGSYQQA 99
            :|:..||.:|.:::|:..:||||.|..::::.|:|.            ..|.:.|.::.......
  Rat    24 DNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADSHDEENVHEQFRKIMNQ 88

  Fly   100 LTRDN---NFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDF-HPPYNKRTADGINRAVATK 160
            |.:.|   :.:..|:||..:...|..:|.:..::.:.:|::.||| |..  :.:...||..|..|
  Rat    89 LNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVESLDFAHAA--EESQKKINSWVENK 151

  Fly   161 TNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNF 225
            |||||.|:.....||..|..|:||.|.:...|...|...:|.:..|......|..|..|.....|
  Rat   152 TNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDKFWLNKNTSKPVQMMRQTNEF 216

  Fly   226 NYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGA--MSQQKVEVLL 288
            |:..:..:.||:||:||:..:.||.:|||...|||:.|::.||...|||....  |...::.:.|
  Rat   217 NFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSADTLLAWTSPKNMRMTQLNLSL 281

  Fly   289 PKFSVTFGLGLEGPFKKLGVHTMFS-RDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLET 352
            |:|.|.....|.||.:.:|:...|: :..||..| .......::.|.||:.:||.|.|.:....|
  Rat   282 PRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SSTKGLVVSKVLHKSFLEVNEEGAEAAAAT 345

  Fly   353 GLLKGLFS--RSKKFEADHPFVFAIK--YKDSIAFIGHIAN 389
            |:...:.|  |:.:|..:.||:..||  ..:||.|.|.:::
  Rat   346 GVETRILSAPRTTEFTCNRPFIVFIKPNNTNSILFFGRVSS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 105/362 (29%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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