DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3j

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:Serpina3j / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:331 Identity:83/331 - (25%)
Similarity:145/331 - (43%) Gaps:22/331 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQ 97
            |..||..:|..:.|:|:..||.:|.:::|...:||||.|..|:.:||:....:...:.... :|:
  Rat    55 AFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEIDIHQ-NYR 118

  Fly    98 QALTR------DNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRA 156
            ..|.|      ......||.:::.::|:....|::.|:..:.:.:...||......|..  ||..
  Rat   119 DLLQRLSQPGGQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKF--INDY 181

  Fly   157 VATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWT 221
            |..::.|||.:::..  |.:||..|::|.:.::..|...|..|.|....|...|.:.|||..|.|
  Rat   182 VMIQSQGKIKEMVTE--LEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVKVLMMKT 244

  Fly   222 LQ-NFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVE 285
            .. ...|.....|...||||.|:....:|.:|....|  :..::.||....|.....::..:.::
  Rat   245 EDLTTPYFWDEELKCTVVELNYKGHGKAMFILPDQGK--MEQVEASLHPGTLRKWTDSLKPRIID 307

  Fly   286 VL-LPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNM---YRMFVSHFINAVEHKANVEVTEAGV 346
            .| |||||::....||....:||:..:|:...|...:   ..:.||..|    |...:.:.|.|.
  Rat   308 ELHLPKFSLSKTYKLENILPELGIMDVFNTQADLSGIAGAKDVRVSQMI----HNTVLGMAETGT 368

  Fly   347 DQPLET 352
            :....|
  Rat   369 EAEATT 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 83/331 (25%)
Serpina3jXP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 83/331 (25%)

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