DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina16

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_853661.2 Gene:Serpina16 / 299271 RGDID:727888 Length:415 Species:Rattus norvegicus


Alignment Length:421 Identity:98/421 - (23%)
Similarity:165/421 - (39%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVIISCLLLLLA------------------TVSQ-SKTVGYDAAADRNLLAADLYNAVAADHLN 46
            ||:.|..|.||||                  .:|| ..|.|.....:....|..||..:......
  Rat     1 MALSILSLWLLLAGLVPCSCDPQTPPPPEASNMSQIPVTQGAPPFFNNQKFALSLYKQLPQPKRG 65

  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRL---GPGDADAVSQRSGSYQQAL-TRDNNFR 107
            :|::.||..|...:.|.....|.:...::.|.|..   |..|..|.|:........| |::....
  Rat    66 KNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKAASEYGKLLSNLLHTKNCGIY 130

  Fly   108 LANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTAD-GINRAVATKTNGKITDILRA 171
            ..:.::|::.|:...:|..:|...::||:..:.|.   |...|. .|:.|:..:|:||||.:|| 
  Rat   131 TGSLLFIDKTLKPAKTFVKLANSSYNSNVVLISFG---NYGLAQKQIDLAIRARTHGKITKLLR- 191

  Fly   172 ELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAK 236
             :|...|...:.|...:...|:..|....|..|.|....|....|..|..:..|.....:.:.:.
  Rat   192 -ILKPPTNLFLANYNFFKGKWKYPFNRKHTRMRYFWLEDGTKTLVPMMQRVGWFQLQYFSQMHSY 255

  Fly   237 VVELPYQNPDFSMLLLLPNRKDG-LRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLE 300
            |::||: ....|.:..||:  || ....:::|..::....|......|..:..||||:...|.||
  Rat   256 VLQLPF-TCSISGVFFLPD--DGKFEESEKALLEQSFETWIQPFPMSKRWLFFPKFSIPVALHLE 317

  Fly   301 GPFKKLGVH-TMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVD----QPLETGLLKGLFS 360
            . .|.:..: .:||...|...:........::...|:..:.|.|.|.:    || |..|....|:
  Rat   318 N-LKHVNSNIKLFSEHMDLSRITLQKAPLTVSTAVHRVELTVNEDGEEKDESQP-EPDLATLHFN 380

  Fly   361 RSKKFEADHPFVFAI--KYKDSIAFIGHIAN 389
            ||        |:..|  :..:|:.|:|.:.|
  Rat   381 RS--------FLLLILDETSNSLLFMGKVVN 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 85/369 (23%)
Serpina16NP_853661.2 serpinA16_HongrES1-like 40..406 CDD:381053 87/382 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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