DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina16

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_853661.2 Gene:Serpina16 / 299271 RGDID:727888 Length:415 Species:Rattus norvegicus


Alignment Length:421 Identity:98/421 - (23%)
Similarity:165/421 - (39%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVIISCLLLLLA------------------TVSQ-SKTVGYDAAADRNLLAADLYNAVAADHLN 46
            ||:.|..|.||||                  .:|| ..|.|.....:....|..||..:......
  Rat     1 MALSILSLWLLLAGLVPCSCDPQTPPPPEASNMSQIPVTQGAPPFFNNQKFALSLYKQLPQPKRG 65

  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRL---GPGDADAVSQRSGSYQQAL-TRDNNFR 107
            :|::.||..|...:.|.....|.:...::.|.|..   |..|..|.|:........| |::....
  Rat    66 KNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKAASEYGKLLSNLLHTKNCGIY 130

  Fly   108 LANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTAD-GINRAVATKTNGKITDILRA 171
            ..:.::|::.|:...:|..:|...::||:..:.|.   |...|. .|:.|:..:|:||||.:|| 
  Rat   131 TGSLLFIDKTLKPAKTFVKLANSSYNSNVVLISFG---NYGLAQKQIDLAIRARTHGKITKLLR- 191

  Fly   172 ELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAK 236
             :|...|...:.|...:...|:..|....|..|.|....|....|..|..:..|.....:.:.:.
  Rat   192 -ILKPPTNLFLANYNFFKGKWKYPFNRKHTRMRYFWLEDGTKTLVPMMQRVGWFQLQYFSQMHSY 255

  Fly   237 VVELPYQNPDFSMLLLLPNRKDG-LRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLE 300
            |::||: ....|.:..||:  || ....:::|..::....|......|..:..||||:...|.||
  Rat   256 VLQLPF-TCSISGVFFLPD--DGKFEESEKALLEQSFETWIQPFPMSKRWLFFPKFSIPVALHLE 317

  Fly   301 GPFKKLGVH-TMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVD----QPLETGLLKGLFS 360
            . .|.:..: .:||...|...:........::...|:..:.|.|.|.:    || |..|....|:
  Rat   318 N-LKHVNSNIKLFSEHMDLSRITLQKAPLTVSTAVHRVELTVNEDGEEKDESQP-EPDLATLHFN 380

  Fly   361 RSKKFEADHPFVFAI--KYKDSIAFIGHIAN 389
            ||        |:..|  :..:|:.|:|.:.|
  Rat   381 RS--------FLLLILDETSNSLLFMGKVVN 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 86/376 (23%)
Serpina16NP_853661.2 serpinA16_HongrES1-like 40..406 CDD:381053 87/382 (23%)

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