DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Serpinb8

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001099418.1 Gene:Serpinb8 / 288937 RGDID:1309833 Length:375 Species:Rattus norvegicus


Alignment Length:377 Identity:103/377 - (27%)
Similarity:183/377 - (48%) Gaps:34/377 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQ 97
            |..|...:..:..:.|:...|.::.|::|:.::||||.||:::.|.|.|. ||.| |.|   .:|
  Rat    12 AISLLKILGEEDKSRNLFFCPMSVSSALAMVYLGAKGNTATQMSQVLGLS-GDGD-VHQ---GFQ 71

  Fly    98 QALTRDNN------FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADG---- 152
            ..|...|.      .:.|..::..|:.:|..:|::..|:.:.:.|:::.|     .:..:|    
  Rat    72 TLLAEVNKSGTQYLLKSACRLFGEESCDFLSTFKESCQKFYQAGIEEMSF-----VKDTEGCRKR 131

  Fly   153 INRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVD 217
            ||..|..||.|||:::|....:...|:.|:||.:.:...|:..|....|....|:|...:...|.
  Rat   132 INDWVLEKTEGKISEVLSPGTVCPLTKLVLVNAMYFKGKWKAQFDRKYTRGMPFKTNQEEKKTVQ 196

  Fly   218 TMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIG--AMS 280
            .|:....|..|.|:.::|:|:.|||...:.||::|||:....|..::::|:.:.|.|...  .::
  Rat   197 MMFKHAKFKMAHVDEVNAQVLALPYAEDELSMVVLLPDESSDLTVVEKALTYEKLRAWTNPETLT 261

  Fly   281 QQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSR-DGDFGNM-YRMFVSHFINAVEHKANVEVTE 343
            :.||:|..|:..:.....||...:.||:...|.. ..||..| .:..|.  ::.|.||..|||.|
  Rat   262 ESKVQVFFPRLKLEESYDLETVLQSLGMTDAFEETKADFSGMTSKKNVP--VSKVAHKCFVEVNE 324

  Fly   344 AGVDQPLETGLLKGLFSRSKKFE----ADHPFVFAIKYK--DSIAFIGHIAN 389
            .|.:....|.:::.  :||.:.|    ||.||:|.|.::  .||.|.|..::
  Rat   325 EGTEAAATTAVIRN--TRSCRIEPRFCADRPFLFFIWHQKTSSILFCGRFSS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 103/377 (27%)
Serpinb8NP_001099418.1 serpin 1..375 CDD:476815 103/377 (27%)

Return to query results.
Submit another query.