DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinf1

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:382 Identity:82/382 - (21%)
Similarity:158/382 - (41%) Gaps:45/382 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NLLAA-------DLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDAD 87
            |.|||       |||...:......|:::||.::.::::...:||:.:|.|.:.:.|..     |
  Rat    52 NKLAAAVSNFGYDLYRLRSGAVSTGNILLSPLSVATALSALSLGAEQRTESVIHRALYY-----D 111

  Fly    88 AVSQRS--GSYQQALTR----DNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYN 146
            .::...  .:|::.|..    :.||:.|:.|.....|..|.||....::.:.:....|..:|..:
  Rat   112 LINNPDIHSTYKELLASVTAPEKNFKSASRIVFERKLRVKSSFVAPLEKSYGTRPRILTGNPRID 176

  Fly   147 KRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSY-SAAWQKAFRLDKTEKRSFRTGS 210
            .:.   ||..|..:..|||.   |:.........:::.||:| ...|...|...||..:.|....
  Rat   177 LQE---INNWVQAQMKGKIA---RSTREMPSALSILLLGVAYFKGQWATKFDSRKTTLQDFHLDE 235

  Fly   211 GQSVKVDTMWTLQN-FNYAEVNSLDAKVVELPYQNPDFSMLLLLP-NRKDGLRSLQQSLSGKNL- 272
            .::|:|..|...:. ..|...:.|:.|:.:||... ..|::..|| .....|..:::||:.:.: 
  Rat   236 DRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPLTG-SMSIIFFLPLTVTQNLTMIEESLTSEFVH 299

  Fly   273 -----LAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINA 332
                 |..|.|:      :.:||..:::...:....:.:.:.::| ...||..:....|.  :..
  Rat   300 DIDRELKTIQAV------LTVPKLKLSYEGDVTNSLQDMKLQSLF-ESPDFSKITGKPVK--LTQ 355

  Fly   333 VEHKANVEVTEAGVDQPLETGLLKGLFSRSKKFEADHPFVFAIKYKD--SIAFIGHI 387
            |||:|..|..|.|........|.....:....:..:.||:|.::..|  ::.|||.|
  Rat   356 VEHRAAFEWNEEGAGTSSNPDLQPVRLTFPLDYHLNRPFIFVLRDTDTGALLFIGRI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 82/382 (21%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 82/382 (21%)

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