DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3n

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:376 Identity:102/376 - (27%)
Similarity:175/376 - (46%) Gaps:33/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLR--LGPGDADAVSQRSGS 95
            |..||..:|..:.::|||.||.:|.:::|:..:||||.:..|:.:||:  |.......:.:..|.
  Rat    55 AFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETPETEIHRGFGH 119

  Fly    96 YQQALT--RDN-NFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAV 157
            ..|.|:  ||. .....|.::|.:.|:....|::.|:..:.:.....||.  .::.....||..|
  Rat   120 LLQRLSQPRDEIQISTGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQ--QSREAKKLINDYV 182

  Fly   158 ATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTL 222
            :.:|.|||..::..  |..:|..|:||.:.:...|:..|....|.:..|.:|..:.||| .|..|
  Rat   183 SKQTQGKIQGLITN--LAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVKV-PMMKL 244

  Fly   223 QNFN--YAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKV- 284
            ::..  |.....|:..||||.|.. :.|.|.:||: :..::.::.||..:.|.....::....: 
  Rat   245 EDLTTPYVRDEELNCTVVELKYTG-NASALFILPD-QGKMQQVEASLQPETLRRWKDSLRPSMID 307

  Fly   285 EVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDF----GNMYRMFVSHFINAVEHKANVEVTEAG 345
            |:.|||||::....||....:||:..:||...|.    |:...|     ::.|.|||.::|.|.|
  Rat   308 ELYLPKFSISADYNLEDVLPELGIKEVFSTQADLSGITGDKDLM-----VSQVVHKAVLDVAETG 367

  Fly   346 VDQPLETGLLKGLFSRSKKFEA-----DHPFVFAIK-YKDSIA-FIGHIAN 389
            .:....||:  .....|.|.:.     |.||:..|. .:.:|| |:..|.|
  Rat   368 TEAAAATGV--KFVPMSAKLDPLIIAFDRPFLMIISDTETAIAPFLAKIFN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 100/372 (27%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 102/376 (27%)
RCL 367..394 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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