DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3c

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_036789.2 Gene:Serpina3c / 24794 RGDID:2972 Length:416 Species:Rattus norvegicus


Alignment Length:396 Identity:96/396 - (24%)
Similarity:182/396 - (45%) Gaps:40/396 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASE 74
            |.||:::...|:             .||..:|..:.::|||.||.:|.:::|:..:|||..|..|
  Rat    43 LTLASINTDFTL-------------SLYKKLALRNPDKNVVFSPLSISAALAILSLGAKDSTMEE 94

  Fly    75 LQQGLRLGPGD--ADAVSQRSGSYQQALTRDNN---FRLANNIYINENLEFKGSFRDVAQRQFDS 134
            :.:||:....:  .:.:.|..|...|.|::..:   ....:.::|::.......|::..:..:.:
  Rat    95 ILEGLKFNLTEITEEEIHQGFGHLLQRLSQPEDQAEINTGSALFIDKEQPILSEFQEKTRALYQA 159

  Fly   135 NIDKLDFHPPYNKRTADG---INRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAF 196
            .....||     |:..:.   ||..|:.:|.|||.::...  |::||..|:||.:.:...|:..|
  Rat   160 EAFVADF-----KQCNEAKKFINDYVSNQTQGKIAELFSD--LDERTSMVLVNYLLFKGKWKVPF 217

  Fly   197 RLDKTEKRSFRTGSGQSVKVDTMWTLQNFN--YAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDG 259
            ..:.|.:..|.....:|||| .|..:::..  |.....|...|:||.|.. :.|.|.:||: :..
  Rat   218 NPNDTFESEFYLDEKRSVKV-PMMKIKDLTTPYVRDEELSCSVLELKYTG-NASALFILPD-QGK 279

  Fly   260 LRSLQQSLSGKNLLAEIGAMSQQKV-EVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYR 323
            ::.::.||..:.|.....::..:.: |:.:||||::....||....:||:..:||:..|...:..
  Rat   280 MQQVESSLQPETLKKWKDSLRPRIISELRMPKFSISTDYNLEEVLPELGIRKIFSQQADLSRITG 344

  Fly   324 MFVSHFINAVEHKANVEVTEAGVDQPLETGL---LKGLFSRSKKFEADHPFVFAIKYKD--SIAF 383
            ....| ::.|.|||.::|.|.|.:....|.:   ||.|.........:.||:..|...:  |:.|
  Rat   345 TKNLH-VSQVVHKAVLDVDETGTEGAAATAVTAALKSLPQTVPLLNFNRPFMLVITDNNGQSVFF 408

  Fly   384 IGHIAN 389
            :|.:.|
  Rat   409 MGKVTN 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 91/372 (24%)
Serpina3cNP_036789.2 SERPIN 54..415 CDD:214513 92/385 (24%)
RCL 365..392 5/26 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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