DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpinb13

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_766440.2 Gene:Serpinb13 / 241196 MGIID:3042250 Length:389 Species:Mus musculus


Alignment Length:386 Identity:107/386 - (27%)
Similarity:187/386 - (48%) Gaps:42/386 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLYNAVAADHLNE----NVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPG--------DAD 87
            ||:.     .||:    ||..||..|.:::.:..:|.:|.||||||:.|....|        :.:
Mouse    14 DLFK-----ELNKTNDGNVFFSPVGISTAIGMIILGTRGATASELQKVLYTEQGTESSRIKSEEE 73

  Fly    88 AVSQRSGSYQQ---------ALTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHP 143
            .:.:|...:.|         ..:.|.:..::|.::..:...|...:.|..::.:.::::.:||  
Mouse    74 EIEKREEIHHQLQMLLTEISKFSNDYDLIISNRLFGEKTYLFLQKYIDYVEKYYHASLEPVDF-- 136

  Fly   144 PYNKRTAD----GINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKR 204
               ...||    .||..|.::||.|:.|:.....||..|:.|::|.|.:...|.:.|:.:.|::.
Mouse   137 ---VNAADESRKKINSWVESQTNVKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEE 198

  Fly   205 SFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSG 269
            .|......|..|..|....:||:..:..|.||:|.:||:|.|.||.:||||..|||..:...:|.
Mouse   199 DFWLNKNLSKPVQMMALCSSFNFTFLEDLQAKIVGIPYKNNDISMFVLLPNDIDGLEKIMDKMSP 263

  Fly   270 KNLL--AEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINA 332
            :.|:  ...|.:.|::|::.||:..|.....||...:.:|:|:.||...|:..|......|..|.
Mouse   264 EKLVEWTSPGHLEQRRVDLRLPRLQVEETYDLEPVLEAVGIHSAFSEHADYSGMSARSGLHAQNF 328

  Fly   333 VEHKANVEVTEAGVDQPLETGL-LKGLFSRS-KKFEADHPFVFAIKYK--DSIAFIGHIAN 389
            : |::.:.|||.||:....||: ||...:.| :....:|||:|.|:::  |||.|.|..::
Mouse   329 L-HRSFLVVTEEGVEATAGTGVGLKVSSAASCELVHCNHPFLFFIRHRESDSILFFGKFSS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 107/382 (28%)
Serpinb13NP_766440.2 SERPIN 4..389 CDD:294093 107/386 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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