DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3m

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:427 Identity:109/427 - (25%)
Similarity:192/427 - (44%) Gaps:56/427 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISCLLLLLATVS------QSKTVGYDAAADRNL-----------------LAADLYNAVAADHLN 46
            |:.|.:|:|.:.      ...|.|.|....:|.                 .|..||..:|..:.:
Mouse     4 IAALGILMAGICPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKMALKNPD 68

  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLG---PGDADAVSQRSGSYQQALTR---DNN 105
            :|:|.||.:|.:::||..:||||.|..|:.:||:..   ..:|| :.|..|...|.|::   .:.
Mouse    69 KNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEAD-IHQGFGHLLQRLSQPEDQDQ 132

  Fly   106 FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILR 170
            ..:.|.::|.::|:....|.:..:..:.:.....||..|  ......||..|:.:|.|.|..::.
Mouse   133 INIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQP--TEATKLINDYVSNQTQGMIKKLIS 195

  Fly   171 AELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTM----WTLQNFNYAEVN 231
            .  |:|||..|:||.:.:...|:.:|....|.:..|.....:||||..|    .|.::|...|  
Mouse   196 E--LDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKFLTTRHFRDEE-- 256

  Fly   232 SLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKV-EVLLPKFSVTF 295
             |...|:||.|.. :.|.|.:||: :..::.::.||..:.|.....::..:|: |:.|||||::.
Mouse   257 -LSCSVLELKYTG-NASALFILPD-QGRMQQVEASLQPETLRKWWKSLKTRKIGELYLPKFSIST 318

  Fly   296 GLGLEGPFKKLGVHTMFSRDGDFGNM---YRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKG 357
            ...|:....:||:..:||:..|...:   ..:.||.    |.|||.::|.|.|.:....||.:.|
Mouse   319 DYNLKDILPELGIKEIFSKQADLSGITGTKDLSVSQ----VVHKAVLDVAETGTEAAAATGFIFG 379

  Fly   358 LFSR---SKKFEADHPFVFAIKYK--DSIAFIGHIAN 389
            ..||   :...:.:.||:..|.:.  .:..|:..:.|
Mouse   380 FRSRRLQTMTVQFNRPFLMVISHTGVQTTLFMAKVTN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 101/392 (26%)
Serpina3mNP_033279.2 SERPIN 56..417 CDD:214513 100/375 (27%)
RCL 367..392 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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