DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3n

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_033278.2 Gene:Serpina3n / 20716 MGIID:105045 Length:418 Species:Mus musculus


Alignment Length:435 Identity:113/435 - (25%)
Similarity:192/435 - (44%) Gaps:72/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISCLLLLLATVSQS------KTVGYDAAA----------DRNLLAA-------DLYNAVAADHLN 46
            |:.|.||:|.:..:      .|:|.|||.          |...||:       .||..:...:.:
Mouse     4 IAALGLLMAGICPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKNPD 68

  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLG---PGDADAVSQRSGSYQQALTRDNN--- 105
            :|:|.||.:|.:::|:..:||||.|..|:.:||:..   ..:|| :.|..|...|.|.:..:   
Mouse    69 KNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEAD-IHQGFGHLLQRLNQPKDQVQ 132

  Fly   106 FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILR 170
            ....:.::|.:..:....|::.|:..:.:.....||..|  ::....||..|..:|.|.|.:::.
Mouse   133 ISTGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQP--RQAKKLINDYVRKQTQGMIKELVS 195

  Fly   171 AELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFN--YAEVNSL 233
            .  |:.||..|:||.:.:.|.|:..|....|.|..|..|..:.|.| .|.::::..  |.....|
Mouse   196 D--LDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIV-PMMSMEDLTTPYFRDEEL 257

  Fly   234 DAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVL-LPKFSVTFGL 297
            ...||||.|.. :.|.:.:||: :..::.::.||..:.|.....::..:.::.| |||||::...
Mouse   258 FCTVVELKYTG-NASAMFILPD-QGKMQQVEASLQPETLRKWKNSLKPRMIDELHLPKFSISTDY 320

  Fly   298 GLEGPFKKLGVHTMFSRDGDFGNM-----YRMFVSHFINAVEHKANVEVTEAGVDQPLETGL--- 354
            .||....|||:..:||...|...:     .|      ::.|.|||.::|.|.|.:....||:   
Mouse   321 SLEDVLSKLGIREVFSTQADLSAITGTKDLR------VSQVVHKAVLDVAETGTEAAAATGVKFV 379

  Fly   355 --------LKGLFSRSKKFEADHPFVFAI-KYKDSIA-FIGHIAN 389
                    |...|:|        ||:..| ..:..|| ||..|||
Mouse   380 PMSAKLYPLTVYFNR--------PFLIMIFDTETEIAPFIAKIAN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 99/390 (25%)
Serpina3nNP_033278.2 serpinA3_A1AC 37..418 CDD:381019 103/402 (26%)
RCL 367..392 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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