DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and Serpina1d

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:422 Identity:96/422 - (22%)
Similarity:190/422 - (45%) Gaps:46/422 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVIISCLLLLLA------------TVSQSKT-------VGYDAAADRNLLAADLYNAVAADHLN 46
            |...||..|||||            .|.::.|       ..::.|.:....|..||..:......
Mouse     1 MTPSISWSLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFALRLYRELVHQSNT 65

  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLG---PGDADAVSQRSGSYQ---QALTR-DN 104
            .|:..||.:|.::.|:..:|:||.|.:::.:||:..   ..:||.    ..|:|   |.|.| |:
Mouse    66 SNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADI----HKSFQHLLQTLNRPDS 126

  Fly   105 NFRLA--NNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITD 167
            ..:|:  |.:::|.:|:....|.:.|:..:.:.:..::|  ..::.....||..|...|.|||.:
Mouse   127 ELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNF--AESEEAKKVINDFVEKGTQGKIVE 189

  Fly   168 ILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNS 232
            .::.  |:..|...:.|.:.:...|::.|..:.||:..|......:|||..|......:....:.
Mouse   190 AVKK--LDQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVHHCSM 252

  Fly   233 LDAKVVELPYQNPDFSMLLLLPNRKDG-LRSLQQSLSGKNLLAEIGAMSQQK--VEVLLPKFSVT 294
            |.:.|:.:.|.. :.:.:.|||:  || ::.|:|:|: |.|:::. .:::::  .::.:|:.|::
Mouse   253 LSSWVLLMDYAG-NTTAVFLLPD--DGKMQHLEQTLN-KELISQF-LLNRRRSDAQIHIPRLSIS 312

  Fly   295 FGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLF 359
            ....|:.....||:..:|:...|...:........::...|||.:.:.|.|.:....|.|....:
Mouse   313 GNYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDETGTEAAAATVLQVATY 377

  Fly   360 SRSKKFEADHPFVFAI--KYKDSIAFIGHIAN 389
            |.......||||:|.|  ::..|..|:|.:.:
Mouse   378 SMPPIVRFDHPFLFIIFEEHTQSPIFVGKVVD 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 85/377 (23%)
Serpina1dNP_033272.1 serpinA1_A1AT 44..412 CDD:381012 86/379 (23%)
RCL 368..387 3/18 (17%)

Return to query results.
Submit another query.