DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and srp-8

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:357 Identity:89/357 - (24%)
Similarity:161/357 - (45%) Gaps:23/357 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRS--GSYQQALTRDNN 105
            || :::.|.||..|..::...:..|:|:|.|::...|.....|.:.|:..|  .:...|:.:|..
 Worm    27 DH-SQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ 90

  Fly   106 FRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILR 170
            .::.|:|.....::.:....|..:..::..:...|.  ...|.|...||:.:...|:|.|..| .
 Worm    91 VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDL--DNEKETIKTINKLIRENTDGHIKKI-N 152

  Fly   171 AELLNDRTEGVI-VNGVSYSAAWQKAFRLDKTEKRSF--RTGSGQSVKVDTMWTLQNFNYAEVNS 232
            .::..|:.:.|: ::...:.|.||..|....|.|:.|  ...|.:::|. ...|..|..|.|.:.
 Worm   153 TKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKF-LHATGANRKYCENDK 216

  Fly   233 LDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGA-MSQQKVEVLLPKFSVTFG 296
            .  :|:.|||.:..|.|.:.||..:.||....::| |.:.:.|:.: :|...|.|.:|.:.....
 Worm   217 F--QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTL-GTSTIQELKSNVSNYLVNVQIPIWRNETE 278

  Fly   297 LGLEGPFKKLGVHTMFSRDGDFGNM-YRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFS 360
            :.|....:.:|:..:.:.....||. ..:.:|.||    |||.:||.|.|......|.::...:.
 Worm   279 IDLNSTLQAIGITKILNESAYIGNFAENVHISEFI----HKAIIEVNENGTSPATNTKVITKRWR 339

  Fly   361 RS----KKFEADHPFVFAIKYKDSIAFIGHIA 388
            ..    :.|.|||||::.|.||:||.|:|..|
 Worm   340 EETGEIRDFIADHPFLYTIHYKNSILFMGVFA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 88/354 (25%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 88/354 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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