DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpind1

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_032249.3 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:385 Identity:95/385 - (24%)
Similarity:175/385 - (45%) Gaps:37/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NLL----AADLYNAVAADH--LNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADA 88
            |:|    |.:||. |..|.  .::|:.|:|..|.::|.:..:|.:|:|..|:...|..    .|.
Mouse   106 NILNAKFAFNLYR-VLKDQATTSDNLFIAPVGISTAMGMISLGLRGETHEEVHSVLHF----RDF 165

  Fly    89 VSQRSGSYQ------------QALTRDN---NFRLANNIYINENLEFKGSFRDVAQRQFDSNIDK 138
            |: .|..|:            ..|.|.|   ..|..|.:||.:....:..|:...:..:.:...:
Mouse   166 VN-ASSKYEVTTIHNLFRKLTHRLFRRNFGYTLRSVNGLYIQKQFPIREDFKAAMREFYFAEAQE 229

  Fly   139 LDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEK 203
            .:|..|.....|   |..:...|.|.|.:.|  |.::..|:.:|:|.:.:...|...|.::.|..
Mouse   230 ANFPDPAFISKA---NNHILKLTKGLIKEAL--ENIDPATQMLILNCIYFKGTWVNKFPVEMTHN 289

  Fly   204 RSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLS 268
            .:||....:.|||..|.|..||..|....||..:::|.|.. ..|||:::|.:..|:::|:..|:
Mouse   290 HNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYVG-GISMLIVVPRKLSGMKTLEAQLT 353

  Fly   269 GKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAV 333
            .:.:.....:|:.:..|||||||.:.....|....|.:|:..:|:::|:...:....::  |:..
Mouse   354 PQVVERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSGISDQRIA--IDLF 416

  Fly   334 EHKANVEVTEAGVDQPLETGLLKGLFSRSKKFEADHPFVFAI-KYKDS-IAFIGHIANYA 391
            :|::.:.|.|.|......|.:.....|...:|..|.||:|.: :::.| :.|:|.:.|.|
Mouse   417 KHQSTITVNEEGTQAAAVTTVGFMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGKVTNPA 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 93/382 (24%)
Serpind1NP_032249.3 serpinD1_HCF2 32..478 CDD:381004 95/385 (25%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.

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