DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina6

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_031644.1 Gene:Serpina6 / 12401 MGIID:88278 Length:397 Species:Mus musculus


Alignment Length:421 Identity:88/421 - (20%)
Similarity:180/421 - (42%) Gaps:61/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IISCLLLLLAT---VSQSKTVGYDAAADRNL------LAADLYNAVAADHLNENVVISPATIQSS 59
            :.:||..|..:   .:|:.| ..|:::.|:|      .|.:||..:.|.:.::|.:|||.:|..:
Mouse     5 LYTCLFWLCTSGLWTTQAVT-DEDSSSHRDLAPTNVDFAFNLYKRLVALNSDKNTLISPVSISMA 68

  Fly    60 MALAFVGAKGQT--------------ASELQQGLRLGPGDADAVSQRSGSYQQALTRDNN----F 106
            :|:..:..:|.|              .:|:.||.:               |..:|.:.::    .
Mouse    69 LAMLSLSTRGSTQYLENLGFNMSKMSEAEIHQGFQ---------------YLNSLLQQSDTGLEM 118

  Fly   107 RLANNIYINENLEFKGSFRDVAQRQFDS---NIDKLDFHPPYNKRTADGINRAVATKTNGKITDI 168
            .:.|.:::.:||:.|.||....:..::|   .|...|:     .:..:.||..|..||.|||..:
Mouse   119 NMGNVMFLLQNLKLKDSFLADTKHYYESEALTIPSKDW-----TKAGEQINNHVKNKTQGKIEHV 178

  Fly   169 LRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSL 233
            :..  |:.....:::|.:.....|:..|..:.|.:..|......:|||..|....|.:|...:::
Mouse   179 VSD--LDSSATLILINYIFLKGIWKLPFSPENTREEDFYVNETSTVKVPMMVQSGNISYFRDSAI 241

  Fly   234 DAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIG-AMSQQKVEVLLPKFSVTFGL 297
            ..::|::.|.. :.:..::||::  |......:...::.:...| .|..:::.:.:||||::...
Mouse   242 PCQMVQMNYVG-NGTTFIILPDQ--GQMDTVVAALNRDTIDRWGKLMIPRQMNLYIPKFSMSDTY 303

  Fly   298 GLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFSRS 362
            .|:.....:|:..:|:...||.:..:  .:.....|.|||.:::.|..|......|....|.|.|
Mouse   304 DLQDVLADVGIKDLFTNQSDFADTTK--DTPLTLTVLHKAMLQLDEGNVLPAATNGPPVHLPSES 366

  Fly   363 KKFEADHPFVFAI--KYKDSIAFIGHIANYA 391
            ...:.:.||:|..  ||..|...:..:.|.|
Mouse   367 FTLKYNRPFIFLAFDKYTWSSLMMSQVMNPA 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 79/386 (20%)
Serpina6NP_031644.1 SERPIN 43..396 CDD:214513 77/379 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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