DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and LOC110439158

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:380 Identity:96/380 - (25%)
Similarity:169/380 - (44%) Gaps:35/380 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NLLAADLYNAV--AADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQR 92
            |..|..||..:  :.|:.::|:..||.|:..:::...:||.|.|..:|..|:    |...|:...
Zfish    41 NDFAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGAGGDTKQQLLSGI----GYNSAIFST 101

  Fly    93 SGSYQ--QALTRDNNFR------LANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRT 149
            ...:|  .:|..|...|      :...:|.::..:....|.:..:..:.::...:||..   |.|
Zfish   102 EEMHQLFHSLLEDIGNRTGVDIDIGTALYASDRFKPHSKFLEDMKEFYHTDGFTVDFRV---KET 163

  Fly   150 ADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSV 214
            .|.||:.|..||:|||...:  :.|...|...::..:.:...|.|.|..:||.:.:|......:|
Zfish   164 VDQINKYVEEKTHGKINQAV--DDLEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTV 226

  Fly   215 KVDTMWTLQNFNYAEV---NSLDAKVVELPYQNPDFSMLLLLPNRKDG---LRSLQQSLSGKNLL 273
            .|..|   ..:.|.:|   ..|..||:.|.| |..|||.|.:|:...|   :..|:.::|.:::.
Zfish   227 PVQMM---HQYEYLKVYYDAELSIKVLCLDY-NDSFSMFLAVPDVHMGRKTIEDLEMTISRQHIE 287

  Fly   274 AEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKAN 338
            ....:..::||::.:||.|:.....|....|.:|:..|||...||..:....:  ||:.|.|||.
Zfish   288 KWKRSAFERKVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTGVSEEKI--FISKVVHKAT 350

  Fly   339 VEVTEAGVDQPLETGL-LKGL-FSRSKKFEADHPFVFAI--KYKDSIAFIGHIAN 389
            :::.|.|......|.: .:.| :|.......|.||:..|  :..|:|.|.|.:.|
Zfish   351 LDIDEKGTTAAAVTTVQFRQLSYSPLSTLSFDRPFMIFITDQTNDNILFFGKVVN 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 95/376 (25%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 95/376 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.