DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ab and Serpina3a

DIOPT Version :10

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:373 Identity:92/373 - (24%)
Similarity:169/373 - (45%) Gaps:36/373 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQ 97
            |..||..:...:.::|:|.|..:|.:::.|..:|||..|..|:.:||:....:........| |:
  Rat    45 AFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPEAEIHQG-YE 108

  Fly    98 QALTRDN------NFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRA 156
            ..|.|.|      .....:.::|.::|:....|::.|:..:.:.....||..|:..:..  ||..
  Rat   109 HLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHEAKKL--INDY 171

  Fly   157 VATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWT 221
            |..:|.|||.:::  .:|:.:|..|:||.:.:...|:..|....|.:..|.....:|||| .|..
  Rat   172 VRKQTQGKIKELI--SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYLDEKKSVKV-PMMK 233

  Fly   222 LQNFN--YAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKV 284
            ::...  |.....|...|:||.|.. :.|.|.:||: :..::.::.||..:.|......:..:::
  Rat   234 IEKLTTPYFRDEELSCSVLELKYTG-NASALFILPD-QGRMQQVEASLQPETLRRWKDTLRPRRI 296

  Fly   285 -EVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNM---YRMFVSHFINAVEHKANVEVTEAG 345
             |:.:||||::..:.|.....:||:..:||:..|...:   ..:.||.    |.|||.::|||.|
  Rat   297 DELRMPKFSISTDMRLGDILPELGIREVFSQQADLSRITGAKDLSVSQ----VVHKAVLDVTETG 357

  Fly   346 VDQPLETGLLKGLFSRSKKF-----EADHPFVFAIKYKDSIAFIGHIA 388
            .:....||:  .:.....||     ..:.||:..|...::     |||
  Rat   358 TEAAAATGV--KIIPMCAKFYYVTMYFNRPFLMIISDTNT-----HIA 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 92/373 (25%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 92/373 (25%)

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